Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTPN6P29350 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTPN6P29350 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTPN6P29350 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PTPN6P29350 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.05■■□□□ 1.12
PTPN6P29350 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PTPN6P29350 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTPN6P29350 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTPN6P29350 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.04■■□□□ 1.12
PTPN6P29350 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTPN6P29350 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PTPN6P29350 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.04■■□□□ 1.12
PTPN6P29350 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTPN6P29350 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PTPN6P29350 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTPN6P29350 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.04■■□□□ 1.12
PTPN6P29350 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PTPN6P29350 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTPN6P29350 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PTPN6P29350 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PTPN6P29350 DUX4L18-201ENST00000553347 1267 ntBASIC22.03■■□□□ 1.12
PTPN6P29350 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PTPN6P29350 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTPN6P29350 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PTPN6P29350 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PTPN6P29350 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PTPN6P29350 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTPN6P29350 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.02■■□□□ 1.12
PTPN6P29350 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTPN6P29350 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.02■■□□□ 1.12
PTPN6P29350 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
PTPN6P29350 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTPN6P29350 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN6P29350 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN6P29350 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN6P29350 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN6P29350 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN6P29350 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN6P29350 AC018755.3-202ENST00000596210 929 ntBASIC22.01■■□□□ 1.11
PTPN6P29350 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN6P29350 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.01■■□□□ 1.11
PTPN6P29350 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN6P29350 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN6P29350 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PTPN6P29350 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN6P29350 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PTPN6P29350 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22■■□□□ 1.11
PTPN6P29350 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PTPN6P29350 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN6P29350 KRT18P10-201ENST00000388836 1287 ntBASIC22■■□□□ 1.11
PTPN6P29350 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN6P29350 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22■■□□□ 1.11
PTPN6P29350 MIR6765-201ENST00000614092 87 ntBASIC22■■□□□ 1.11
PTPN6P29350 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22■■□□□ 1.11
PTPN6P29350 AC068473.5-201ENST00000616428 2072 ntBASIC22■■□□□ 1.11
PTPN6P29350 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22■■□□□ 1.11
PTPN6P29350 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN6P29350 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.99■■□□□ 1.11
PTPN6P29350 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.99■■□□□ 1.11
PTPN6P29350 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.99■■□□□ 1.11
PTPN6P29350 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.99■■□□□ 1.11
PTPN6P29350 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTPN6P29350 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTPN6P29350 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTPN6P29350 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PTPN6P29350 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTPN6P29350 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.98■■□□□ 1.11
PTPN6P29350 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
PTPN6P29350 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTPN6P29350 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTPN6P29350 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTPN6P29350 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTPN6P29350 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.97■■□□□ 1.11
PTPN6P29350 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.97■■□□□ 1.11
PTPN6P29350 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PTPN6P29350 DUSP8P5-201ENST00000422884 1815 ntBASIC21.97■■□□□ 1.11
PTPN6P29350 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN6P29350 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.97■■□□□ 1.11
PTPN6P29350 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PTPN6P29350 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PTPN6P29350 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.97■■□□□ 1.11
PTPN6P29350 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PTPN6P29350 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.97■■□□□ 1.11
PTPN6P29350 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN6P29350 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PTPN6P29350 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.96■■□□□ 1.11
PTPN6P29350 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN6P29350 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN6P29350 AC012676.1-201ENST00000574705 1949 ntBASIC21.96■■□□□ 1.11
PTPN6P29350 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN6P29350 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN6P29350 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.96■■□□□ 1.11
PTPN6P29350 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN6P29350 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.96■■□□□ 1.11
PTPN6P29350 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN6P29350 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN6P29350 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PTPN6P29350 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN6P29350 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.96■■□□□ 1.11
PTPN6P29350 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms