Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.09■□□□□ 0.97
GDF1P27539 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.09■□□□□ 0.97
GDF1P27539 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.09■□□□□ 0.97
GDF1P27539 MIR6089-201ENST00000616698 64 ntBASIC21.09■□□□□ 0.97
GDF1P27539 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
GDF1P27539 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.09■□□□□ 0.97
GDF1P27539 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GDF1P27539 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GDF1P27539 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GDF1P27539 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GDF1P27539 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GDF1P27539 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
GDF1P27539 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.08■□□□□ 0.97
GDF1P27539 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GDF1P27539 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF1P27539 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF1P27539 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF1P27539 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF1P27539 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.07■□□□□ 0.96
GDF1P27539 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.07■□□□□ 0.96
GDF1P27539 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF1P27539 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GDF1P27539 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDF1P27539 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.06■□□□□ 0.96
GDF1P27539 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.06■□□□□ 0.96
GDF1P27539 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDF1P27539 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GDF1P27539 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDF1P27539 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
GDF1P27539 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDF1P27539 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.05■□□□□ 0.96
GDF1P27539 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.05■□□□□ 0.96
GDF1P27539 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDF1P27539 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
GDF1P27539 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.04■□□□□ 0.96
GDF1P27539 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.04■□□□□ 0.96
GDF1P27539 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.04■□□□□ 0.96
GDF1P27539 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.04■□□□□ 0.96
GDF1P27539 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.04■□□□□ 0.96
GDF1P27539 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GDF1P27539 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GDF1P27539 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF1P27539 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
GDF1P27539 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.04■□□□□ 0.96
GDF1P27539 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.04■□□□□ 0.96
GDF1P27539 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF1P27539 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDF1P27539 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.03■□□□□ 0.96
GDF1P27539 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GDF1P27539 SNX5-217ENST00000606557 1087 ntBASIC21.03■□□□□ 0.96
GDF1P27539 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDF1P27539 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.03■□□□□ 0.96
GDF1P27539 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDF1P27539 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GDF1P27539 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GDF1P27539 MIR6724-1-201ENST00000616420 92 ntBASIC21.02■□□□□ 0.96
GDF1P27539 MIR6724-2-201ENST00000616483 92 ntBASIC21.02■□□□□ 0.96
GDF1P27539 MIR6724-4-201ENST00000617390 92 ntBASIC21.02■□□□□ 0.96
GDF1P27539 MIR6724-3-201ENST00000622482 92 ntBASIC21.02■□□□□ 0.96
GDF1P27539 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.02■□□□□ 0.96
GDF1P27539 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GDF1P27539 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GDF1P27539 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF1P27539 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDF1P27539 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF1P27539 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF1P27539 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF1P27539 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF1P27539 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GDF1P27539 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.01■□□□□ 0.95
GDF1P27539 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDF1P27539 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
GDF1P27539 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GDF1P27539 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF1P27539 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF1P27539 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21■□□□□ 0.95
GDF1P27539 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF1P27539 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDF1P27539 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDF1P27539 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21■□□□□ 0.95
GDF1P27539 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF1P27539 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21■□□□□ 0.95
GDF1P27539 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF1P27539 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF1P27539 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.99■□□□□ 0.95
GDF1P27539 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.99■□□□□ 0.95
GDF1P27539 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.99■□□□□ 0.95
GDF1P27539 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
GDF1P27539 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
GDF1P27539 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF1P27539 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF1P27539 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF1P27539 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GDF1P27539 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF1P27539 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.98■□□□□ 0.95
GDF1P27539 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDF1P27539 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
GDF1P27539 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF1P27539 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GDF1P27539 AC022211.4-201ENST00000625094 2161 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms