Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 AC020928.2-201ENST00000588717 2197 ntBASIC19.66■□□□□ 0.74
TNFRSF1AP19438 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1AP19438 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1AP19438 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1AP19438 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1AP19438 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFRSF1AP19438 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFRSF1AP19438 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFRSF1AP19438 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1AP19438 AF131216.4-201ENST00000638924 1588 ntBASIC19.65■□□□□ 0.74
TNFRSF1AP19438 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.64■□□□□ 0.74
TNFRSF1AP19438 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.64■□□□□ 0.74
TNFRSF1AP19438 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFRSF1AP19438 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
TNFRSF1AP19438 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1AP19438 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1AP19438 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1AP19438 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TNFRSF1AP19438 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TNFRSF1AP19438 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1AP19438 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1AP19438 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1AP19438 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1AP19438 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1AP19438 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1AP19438 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF1AP19438 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF1AP19438 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF1AP19438 GUSBP5-201ENST00000418136 578 ntBASIC19.63■□□□□ 0.73
TNFRSF1AP19438 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TNFRSF1AP19438 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1AP19438 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1AP19438 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1AP19438 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1AP19438 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1AP19438 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1AP19438 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1AP19438 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1AP19438 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.62■□□□□ 0.73
TNFRSF1AP19438 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1AP19438 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.62■□□□□ 0.73
TNFRSF1AP19438 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1AP19438 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1AP19438 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
TNFRSF1AP19438 AC092028.1-203ENST00000608262 953 ntBASIC19.61■□□□□ 0.73
TNFRSF1AP19438 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1AP19438 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1AP19438 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFRSF1AP19438 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1AP19438 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFRSF1AP19438 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1AP19438 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1AP19438 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1AP19438 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1AP19438 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1AP19438 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.6■□□□□ 0.73
TNFRSF1AP19438 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1AP19438 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1AP19438 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1AP19438 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1AP19438 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TNFRSF1AP19438 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFRSF1AP19438 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF1AP19438 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFRSF1AP19438 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF1AP19438 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFRSF1AP19438 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.59■□□□□ 0.73
TNFRSF1AP19438 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TNFRSF1AP19438 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF1AP19438 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFRSF1AP19438 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.58■□□□□ 0.73
TNFRSF1AP19438 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFRSF1AP19438 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.58■□□□□ 0.73
TNFRSF1AP19438 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1AP19438 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.58■□□□□ 0.72
TNFRSF1AP19438 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TNFRSF1AP19438 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1AP19438 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1AP19438 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TNFRSF1AP19438 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1AP19438 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.58■□□□□ 0.72
TNFRSF1AP19438 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1AP19438 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1AP19438 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1AP19438 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms