Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.2■□□□□ 0.66
ATF4P18848 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATF4P18848 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATF4P18848 ZNRF2P2-203ENST00000454624 420 ntBASIC19.2■□□□□ 0.66
ATF4P18848 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATF4P18848 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATF4P18848 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF4P18848 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF4P18848 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF4P18848 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF4P18848 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATF4P18848 LINC01124-201ENST00000409786 2117 ntBASIC19.19■□□□□ 0.66
ATF4P18848 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF4P18848 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF4P18848 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.19■□□□□ 0.66
ATF4P18848 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF4P18848 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF4P18848 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATF4P18848 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.19■□□□□ 0.66
ATF4P18848 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF4P18848 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
ATF4P18848 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF4P18848 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF4P18848 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
ATF4P18848 DUX4L29-201ENST00000425409 679 ntBASIC19.18■□□□□ 0.66
ATF4P18848 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATF4P18848 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.18■□□□□ 0.66
ATF4P18848 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.18■□□□□ 0.66
ATF4P18848 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF4P18848 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATF4P18848 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ATF4P18848 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.18■□□□□ 0.66
ATF4P18848 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATF4P18848 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATF4P18848 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATF4P18848 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.17■□□□□ 0.66
ATF4P18848 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATF4P18848 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATF4P18848 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.17■□□□□ 0.66
ATF4P18848 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATF4P18848 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF4P18848 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF4P18848 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.16■□□□□ 0.66
ATF4P18848 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.16■□□□□ 0.66
ATF4P18848 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF4P18848 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.16■□□□□ 0.66
ATF4P18848 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF4P18848 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF4P18848 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATF4P18848 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF4P18848 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.16■□□□□ 0.66
ATF4P18848 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATF4P18848 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ATF4P18848 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF4P18848 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF4P18848 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF4P18848 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATF4P18848 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ATF4P18848 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ATF4P18848 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF4P18848 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF4P18848 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ATF4P18848 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF4P18848 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF4P18848 AF106564.1-201ENST00000607058 2553 ntBASIC19.15■□□□□ 0.66
ATF4P18848 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF4P18848 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ATF4P18848 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.15■□□□□ 0.66
ATF4P18848 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ATF4P18848 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ATF4P18848 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF4P18848 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATF4P18848 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.14■□□□□ 0.65
ATF4P18848 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF4P18848 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF4P18848 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ATF4P18848 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF4P18848 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.14■□□□□ 0.65
ATF4P18848 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.14■□□□□ 0.65
ATF4P18848 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF4P18848 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.14■□□□□ 0.65
ATF4P18848 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF4P18848 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF4P18848 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF4P18848 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF4P18848 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF4P18848 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF4P18848 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF4P18848 AC137767.1-201ENST00000602918 1920 ntBASIC19.13■□□□□ 0.65
ATF4P18848 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATF4P18848 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATF4P18848 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF4P18848 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.13■□□□□ 0.65
ATF4P18848 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ATF4P18848 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.13■□□□□ 0.65
ATF4P18848 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ATF4P18848 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF4P18848 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATF4P18848 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATF4P18848 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms