Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1DP16402 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1DP16402 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H1DP16402 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.68■□□□□ 0.74
HIST1H1DP16402 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H1DP16402 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H1DP16402 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
HIST1H1DP16402 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H1DP16402 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.68■□□□□ 0.74
HIST1H1DP16402 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HIST1H1DP16402 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
HIST1H1DP16402 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1DP16402 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1DP16402 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1DP16402 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1DP16402 ECEL1P2-201ENST00000461596 1295 ntBASIC19.67■□□□□ 0.74
HIST1H1DP16402 AC093536.1-201ENST00000569153 554 ntBASIC19.67■□□□□ 0.74
HIST1H1DP16402 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST1H1DP16402 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1DP16402 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1DP16402 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST1H1DP16402 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H1DP16402 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H1DP16402 C9orf163-202ENST00000624034 2573 ntBASIC19.66■□□□□ 0.74
HIST1H1DP16402 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H1DP16402 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HIST1H1DP16402 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H1DP16402 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HIST1H1DP16402 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H1DP16402 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H1DP16402 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H1DP16402 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H1DP16402 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H1DP16402 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.65■□□□□ 0.74
HIST1H1DP16402 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H1DP16402 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HIST1H1DP16402 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
HIST1H1DP16402 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H1DP16402 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H1DP16402 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H1DP16402 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H1DP16402 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.64■□□□□ 0.74
HIST1H1DP16402 KRT18P10-201ENST00000388836 1287 ntBASIC19.64■□□□□ 0.73
HIST1H1DP16402 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.64■□□□□ 0.73
HIST1H1DP16402 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HIST1H1DP16402 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST1H1DP16402 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HIST1H1DP16402 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H1DP16402 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
HIST1H1DP16402 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.63■□□□□ 0.73
HIST1H1DP16402 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.63■□□□□ 0.73
HIST1H1DP16402 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.63■□□□□ 0.73
HIST1H1DP16402 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HIST1H1DP16402 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST1H1DP16402 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H1DP16402 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H1DP16402 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H1DP16402 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H1DP16402 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H1DP16402 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST1H1DP16402 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H1DP16402 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H1DP16402 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H1DP16402 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H1DP16402 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HIST1H1DP16402 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.61■□□□□ 0.73
HIST1H1DP16402 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.61■□□□□ 0.73
HIST1H1DP16402 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.61■□□□□ 0.73
HIST1H1DP16402 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
HIST1H1DP16402 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H1DP16402 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H1DP16402 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H1DP16402 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H1DP16402 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H1DP16402 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H1DP16402 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H1DP16402 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
HIST1H1DP16402 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.59■□□□□ 0.73
HIST1H1DP16402 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.59■□□□□ 0.73
HIST1H1DP16402 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1DP16402 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1DP16402 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1DP16402 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1DP16402 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.59■□□□□ 0.73
HIST1H1DP16402 AC007029.1-201ENST00000604183 313 ntBASIC19.59■□□□□ 0.73
HIST1H1DP16402 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1DP16402 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1DP16402 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1DP16402 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1DP16402 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.59■□□□□ 0.73
HIST1H1DP16402 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1DP16402 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.59■□□□□ 0.73
HIST1H1DP16402 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1DP16402 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H1DP16402 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H1DP16402 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H1DP16402 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H1DP16402 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H1DP16402 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H1DP16402 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms