Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.94■■□□□ 1.1
RAB40ALP0C0E4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RAB40ALP0C0E4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAB40ALP0C0E4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RAB40ALP0C0E4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAB40ALP0C0E4 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.93■■□□□ 1.1
RAB40ALP0C0E4 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.93■■□□□ 1.1
RAB40ALP0C0E4 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.93■■□□□ 1.1
RAB40ALP0C0E4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.93■■□□□ 1.1
RAB40ALP0C0E4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.93■■□□□ 1.1
RAB40ALP0C0E4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40ALP0C0E4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB40ALP0C0E4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.91■■□□□ 1.1
RAB40ALP0C0E4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.91■■□□□ 1.1
RAB40ALP0C0E4 AL139246.5-201ENST00000606645 996 ntBASIC21.91■■□□□ 1.1
RAB40ALP0C0E4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.91■■□□□ 1.1
RAB40ALP0C0E4 AC091060.1-201ENST00000623524 1766 ntBASIC21.91■■□□□ 1.1
RAB40ALP0C0E4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.91■■□□□ 1.1
RAB40ALP0C0E4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB40ALP0C0E4 AC092803.2-201ENST00000564287 1899 ntBASIC21.9■■□□□ 1.1
RAB40ALP0C0E4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
RAB40ALP0C0E4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB40ALP0C0E4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAB40ALP0C0E4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAB40ALP0C0E4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.9■■□□□ 1.1
RAB40ALP0C0E4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.9■■□□□ 1.1
RAB40ALP0C0E4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.9■■□□□ 1.1
RAB40ALP0C0E4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
RAB40ALP0C0E4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAB40ALP0C0E4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RAB40ALP0C0E4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RAB40ALP0C0E4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.89■■□□□ 1.09
RAB40ALP0C0E4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
RAB40ALP0C0E4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.88■■□□□ 1.09
RAB40ALP0C0E4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RAB40ALP0C0E4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB40ALP0C0E4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RAB40ALP0C0E4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.88■■□□□ 1.09
RAB40ALP0C0E4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.88■■□□□ 1.09
RAB40ALP0C0E4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB40ALP0C0E4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.88■■□□□ 1.09
RAB40ALP0C0E4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB40ALP0C0E4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB40ALP0C0E4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB40ALP0C0E4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.87■■□□□ 1.09
RAB40ALP0C0E4 MIR638-201ENST00000385237 100 ntBASIC21.87■■□□□ 1.09
RAB40ALP0C0E4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.87■■□□□ 1.09
RAB40ALP0C0E4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.87■■□□□ 1.09
RAB40ALP0C0E4 AL512631.2-201ENST00000604634 923 ntBASIC21.87■■□□□ 1.09
RAB40ALP0C0E4 MIR4466-201ENST00000606121 54 ntBASIC21.87■■□□□ 1.09
RAB40ALP0C0E4 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.87■■□□□ 1.09
RAB40ALP0C0E4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RAB40ALP0C0E4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
RAB40ALP0C0E4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB40ALP0C0E4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB40ALP0C0E4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB40ALP0C0E4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB40ALP0C0E4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RAB40ALP0C0E4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.86■■□□□ 1.09
RAB40ALP0C0E4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB40ALP0C0E4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB40ALP0C0E4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RAB40ALP0C0E4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB40ALP0C0E4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
RAB40ALP0C0E4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB40ALP0C0E4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
RAB40ALP0C0E4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.85■■□□□ 1.09
RAB40ALP0C0E4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.85■■□□□ 1.09
RAB40ALP0C0E4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.84■■□□□ 1.09
RAB40ALP0C0E4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB40ALP0C0E4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RAB40ALP0C0E4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB40ALP0C0E4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAB40ALP0C0E4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.84■■□□□ 1.09
RAB40ALP0C0E4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.84■■□□□ 1.09
RAB40ALP0C0E4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB40ALP0C0E4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.83■■□□□ 1.09
RAB40ALP0C0E4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB40ALP0C0E4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
RAB40ALP0C0E4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAB40ALP0C0E4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RAB40ALP0C0E4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.83■■□□□ 1.08
RAB40ALP0C0E4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.83■■□□□ 1.08
RAB40ALP0C0E4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
RAB40ALP0C0E4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAB40ALP0C0E4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAB40ALP0C0E4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAB40ALP0C0E4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms