Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.95■□□□□ 0.94
HMGN1P05114 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HMGN1P05114 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HMGN1P05114 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGN1P05114 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGN1P05114 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN1P05114 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN1P05114 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN1P05114 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HMGN1P05114 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HMGN1P05114 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN1P05114 MIR639-201ENST00000384974 98 ntBASIC20.94■□□□□ 0.94
HMGN1P05114 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN1P05114 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HMGN1P05114 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN1P05114 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.94■□□□□ 0.94
HMGN1P05114 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN1P05114 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN1P05114 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HMGN1P05114 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
HMGN1P05114 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN1P05114 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGN1P05114 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGN1P05114 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGN1P05114 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGN1P05114 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HMGN1P05114 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGN1P05114 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGN1P05114 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN1P05114 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN1P05114 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HMGN1P05114 RAP2CP1-202ENST00000605179 643 ntBASIC20.92■□□□□ 0.94
HMGN1P05114 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGN1P05114 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN1P05114 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGN1P05114 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN1P05114 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HMGN1P05114 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGN1P05114 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
HMGN1P05114 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.91■□□□□ 0.94
HMGN1P05114 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGN1P05114 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGN1P05114 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HMGN1P05114 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.9■□□□□ 0.94
HMGN1P05114 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGN1P05114 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.9■□□□□ 0.94
HMGN1P05114 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.9■□□□□ 0.94
HMGN1P05114 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN1P05114 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGN1P05114 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGN1P05114 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HMGN1P05114 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGN1P05114 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGN1P05114 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGN1P05114 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGN1P05114 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGN1P05114 MIR7108-201ENST00000614319 87 ntBASIC20.89■□□□□ 0.93
HMGN1P05114 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HMGN1P05114 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGN1P05114 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.88■□□□□ 0.93
HMGN1P05114 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HMGN1P05114 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGN1P05114 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.88■□□□□ 0.93
HMGN1P05114 AC026202.3-201ENST00000600805 1127 ntBASIC20.88■□□□□ 0.93
HMGN1P05114 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGN1P05114 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGN1P05114 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.88■□□□□ 0.93
HMGN1P05114 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HMGN1P05114 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HMGN1P05114 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
HMGN1P05114 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN1P05114 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN1P05114 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.87■□□□□ 0.93
HMGN1P05114 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN1P05114 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN1P05114 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN1P05114 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN1P05114 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN1P05114 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN1P05114 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN1P05114 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN1P05114 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HMGN1P05114 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN1P05114 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN1P05114 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGN1P05114 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
HMGN1P05114 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms