Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.11■■■□□ 2.09
CHGBP05060 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.11■■■□□ 2.09
CHGBP05060 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CHGBP05060 HLA-L-211ENST00000482052 1765 ntBASIC28.11■■■□□ 2.09
CHGBP05060 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHGBP05060 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHGBP05060 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHGBP05060 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHGBP05060 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHGBP05060 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHGBP05060 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHGBP05060 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHGBP05060 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.08■■■□□ 2.09
CHGBP05060 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHGBP05060 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
CHGBP05060 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHGBP05060 GUSBP5-201ENST00000418136 578 ntBASIC28.07■■■□□ 2.08
CHGBP05060 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.07■■■□□ 2.08
CHGBP05060 AC021242.3-201ENST00000607598 1377 ntBASIC28.07■■■□□ 2.08
CHGBP05060 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHGBP05060 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CHGBP05060 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CHGBP05060 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHGBP05060 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.06■■■□□ 2.08
CHGBP05060 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.06■■■□□ 2.08
CHGBP05060 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHGBP05060 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHGBP05060 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
CHGBP05060 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.05■■■□□ 2.08
CHGBP05060 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHGBP05060 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHGBP05060 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHGBP05060 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHGBP05060 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.04■■■□□ 2.08
CHGBP05060 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.03■■■□□ 2.08
CHGBP05060 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CHGBP05060 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHGBP05060 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
CHGBP05060 MIR4787-201ENST00000607364 84 ntBASIC28.03■■■□□ 2.08
CHGBP05060 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CHGBP05060 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CHGBP05060 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHGBP05060 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.02■■■□□ 2.08
CHGBP05060 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CHGBP05060 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.02■■■□□ 2.08
CHGBP05060 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CHGBP05060 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHGBP05060 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
CHGBP05060 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
CHGBP05060 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.01■■■□□ 2.07
CHGBP05060 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.01■■■□□ 2.07
CHGBP05060 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.01■■■□□ 2.07
CHGBP05060 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHGBP05060 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CHGBP05060 BX664725.1-201ENST00000438252 379 ntBASIC28.01■■■□□ 2.07
CHGBP05060 Z92544.1-202ENST00000571933 1220 ntBASIC28.01■■■□□ 2.07
CHGBP05060 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHGBP05060 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.01■■■□□ 2.07
CHGBP05060 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.01■■■□□ 2.07
CHGBP05060 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHGBP05060 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CHGBP05060 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CHGBP05060 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28■■■□□ 2.07
CHGBP05060 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28■■■□□ 2.07
CHGBP05060 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28■■■□□ 2.07
CHGBP05060 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CHGBP05060 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CHGBP05060 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.99■■■□□ 2.07
CHGBP05060 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CHGBP05060 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.99■■■□□ 2.07
CHGBP05060 UNC93B8-201ENST00000511903 705 ntBASIC27.99■■■□□ 2.07
CHGBP05060 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.99■■■□□ 2.07
CHGBP05060 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.99■■■□□ 2.07
CHGBP05060 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.98■■■□□ 2.07
CHGBP05060 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CHGBP05060 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.98■■■□□ 2.07
CHGBP05060 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHGBP05060 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.98■■■□□ 2.07
CHGBP05060 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.98■■■□□ 2.07
CHGBP05060 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHGBP05060 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHGBP05060 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
CHGBP05060 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.97■■■□□ 2.07
CHGBP05060 AC131274.2-201ENST00000580697 1507 ntBASIC27.97■■■□□ 2.07
CHGBP05060 AL139125.2-201ENST00000623134 1869 ntBASIC27.96■■■□□ 2.07
CHGBP05060 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.96■■■□□ 2.07
CHGBP05060 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
CHGBP05060 AP003733.4-201ENST00000623785 1697 ntBASIC27.96■■■□□ 2.07
CHGBP05060 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.96■■■□□ 2.07
CHGBP05060 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
CHGBP05060 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.95■■■□□ 2.06
CHGBP05060 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
CHGBP05060 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.95■■■□□ 2.06
CHGBP05060 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CHGBP05060 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.94■■■□□ 2.06
CHGBP05060 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.94■■■□□ 2.06
CHGBP05060 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.94■■■□□ 2.06
CHGBP05060 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.94■■■□□ 2.06
CHGBP05060 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.94■■■□□ 2.06
CHGBP05060 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms