Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
MT-ND3P03897 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.53■■□□□ 1.36
MT-ND3P03897 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
MT-ND3P03897 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
MT-ND3P03897 AC009831.1-201ENST00000580420 1582 ntBASIC23.52■■□□□ 1.36
MT-ND3P03897 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
MT-ND3P03897 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
MT-ND3P03897 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MT-ND3P03897 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MT-ND3P03897 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
MT-ND3P03897 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
MT-ND3P03897 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.52■■□□□ 1.36
MT-ND3P03897 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.52■■□□□ 1.36
MT-ND3P03897 MIR6089-201ENST00000616698 64 ntBASIC23.52■■□□□ 1.36
MT-ND3P03897 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
MT-ND3P03897 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MT-ND3P03897 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
MT-ND3P03897 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.51■■□□□ 1.35
MT-ND3P03897 RP9P-202ENST00000450133 1212 ntBASIC23.51■■□□□ 1.35
MT-ND3P03897 AL592293.1-201ENST00000502889 1188 ntBASIC23.51■■□□□ 1.35
MT-ND3P03897 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
MT-ND3P03897 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.51■■□□□ 1.35
MT-ND3P03897 DUSP8P5-201ENST00000422884 1815 ntBASIC23.51■■□□□ 1.35
MT-ND3P03897 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MT-ND3P03897 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MT-ND3P03897 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
MT-ND3P03897 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MT-ND3P03897 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MT-ND3P03897 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
MT-ND3P03897 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.5■■□□□ 1.35
MT-ND3P03897 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MT-ND3P03897 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MT-ND3P03897 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
MT-ND3P03897 AC129492.7-201ENST00000622992 756 ntBASIC23.5■■□□□ 1.35
MT-ND3P03897 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
MT-ND3P03897 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
MT-ND3P03897 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.5■■□□□ 1.35
MT-ND3P03897 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MT-ND3P03897 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
MT-ND3P03897 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MT-ND3P03897 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MT-ND3P03897 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
MT-ND3P03897 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
MT-ND3P03897 MIR3960-201ENST00000583311 91 ntBASIC23.49■■□□□ 1.35
MT-ND3P03897 AC026202.3-201ENST00000600805 1127 ntBASIC23.49■■□□□ 1.35
MT-ND3P03897 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MT-ND3P03897 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.49■■□□□ 1.35
MT-ND3P03897 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
MT-ND3P03897 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
MT-ND3P03897 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MT-ND3P03897 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
MT-ND3P03897 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.49■■□□□ 1.35
MT-ND3P03897 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
MT-ND3P03897 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
MT-ND3P03897 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
MT-ND3P03897 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
MT-ND3P03897 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MT-ND3P03897 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MT-ND3P03897 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
MT-ND3P03897 ABCB10P4-201ENST00000566803 2184 ntBASIC23.48■■□□□ 1.35
MT-ND3P03897 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MT-ND3P03897 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MT-ND3P03897 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
MT-ND3P03897 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
MT-ND3P03897 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MT-ND3P03897 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MT-ND3P03897 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
MT-ND3P03897 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.46■■□□□ 1.35
MT-ND3P03897 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MT-ND3P03897 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
MT-ND3P03897 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.45■■□□□ 1.35
MT-ND3P03897 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.45■■□□□ 1.34
MT-ND3P03897 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MT-ND3P03897 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MT-ND3P03897 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
MT-ND3P03897 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.45■■□□□ 1.34
MT-ND3P03897 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.45■■□□□ 1.34
MT-ND3P03897 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.45■■□□□ 1.34
MT-ND3P03897 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
MT-ND3P03897 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.44■■□□□ 1.34
MT-ND3P03897 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
MT-ND3P03897 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.44■■□□□ 1.34
MT-ND3P03897 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
MT-ND3P03897 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.44■■□□□ 1.34
MT-ND3P03897 AC093536.1-201ENST00000569153 554 ntBASIC23.44■■□□□ 1.34
MT-ND3P03897 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
MT-ND3P03897 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
MT-ND3P03897 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MT-ND3P03897 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MT-ND3P03897 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
MT-ND3P03897 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MT-ND3P03897 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
MT-ND3P03897 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
MT-ND3P03897 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
MT-ND3P03897 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
MT-ND3P03897 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.42■■□□□ 1.34
MT-ND3P03897 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
MT-ND3P03897 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MT-ND3P03897 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.41■■□□□ 1.34
MT-ND3P03897 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms