Protein–RNA interactions for Protein: P00414

MT-CO3, Cytochrome c oxidase subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO3P00414 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.27■■□□□ 1.16
MT-CO3P00414 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MT-CO3P00414 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
MT-CO3P00414 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MT-CO3P00414 AC097639.1-201ENST00000565519 1891 ntBASIC22.27■■□□□ 1.16
MT-CO3P00414 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.27■■□□□ 1.16
MT-CO3P00414 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MT-CO3P00414 AC005703.6-201ENST00000623265 1329 ntBASIC22.27■■□□□ 1.16
MT-CO3P00414 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
MT-CO3P00414 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-CO3P00414 MIR939-201ENST00000401314 82 ntBASIC22.26■■□□□ 1.15
MT-CO3P00414 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MT-CO3P00414 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.26■■□□□ 1.15
MT-CO3P00414 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-CO3P00414 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-CO3P00414 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MT-CO3P00414 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO3P00414 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.25■■□□□ 1.15
MT-CO3P00414 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.25■■□□□ 1.15
MT-CO3P00414 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.25■■□□□ 1.15
MT-CO3P00414 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO3P00414 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO3P00414 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-CO3P00414 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-CO3P00414 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.24■■□□□ 1.15
MT-CO3P00414 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.24■■□□□ 1.15
MT-CO3P00414 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.24■■□□□ 1.15
MT-CO3P00414 AP001330.3-201ENST00000520123 633 ntBASIC22.24■■□□□ 1.15
MT-CO3P00414 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.24■■□□□ 1.15
MT-CO3P00414 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.24■■□□□ 1.15
MT-CO3P00414 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-CO3P00414 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-CO3P00414 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.23■■□□□ 1.15
MT-CO3P00414 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
MT-CO3P00414 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.23■■□□□ 1.15
MT-CO3P00414 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.23■■□□□ 1.15
MT-CO3P00414 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.23■■□□□ 1.15
MT-CO3P00414 AC092171.4-201ENST00000609130 632 ntBASIC22.23■■□□□ 1.15
MT-CO3P00414 SYT6-210ENST00000641643 1587 ntBASIC22.23■■□□□ 1.15
MT-CO3P00414 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-CO3P00414 AC091305.1-201ENST00000479476 895 ntBASIC22.22■■□□□ 1.15
MT-CO3P00414 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.22■■□□□ 1.15
MT-CO3P00414 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
MT-CO3P00414 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MT-CO3P00414 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.22■■□□□ 1.15
MT-CO3P00414 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MT-CO3P00414 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.21■■□□□ 1.15
MT-CO3P00414 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MT-CO3P00414 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.21■■□□□ 1.15
MT-CO3P00414 MIR6821-201ENST00000617625 74 ntBASIC22.21■■□□□ 1.15
MT-CO3P00414 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.21■■□□□ 1.15
MT-CO3P00414 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-CO3P00414 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
MT-CO3P00414 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
MT-CO3P00414 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.21■■□□□ 1.15
MT-CO3P00414 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MT-CO3P00414 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
MT-CO3P00414 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-CO3P00414 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.2■■□□□ 1.14
MT-CO3P00414 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.2■■□□□ 1.14
MT-CO3P00414 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MT-CO3P00414 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MT-CO3P00414 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-CO3P00414 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
MT-CO3P00414 AC096887.2-201ENST00000623443 1957 ntBASIC22.19■■□□□ 1.14
MT-CO3P00414 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-CO3P00414 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-CO3P00414 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.19■■□□□ 1.14
MT-CO3P00414 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.19■■□□□ 1.14
MT-CO3P00414 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MT-CO3P00414 MIR4767-201ENST00000582827 78 ntBASIC22.19■■□□□ 1.14
MT-CO3P00414 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-CO3P00414 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MT-CO3P00414 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-CO3P00414 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MT-CO3P00414 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO3P00414 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO3P00414 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO3P00414 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO3P00414 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO3P00414 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO3P00414 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.18■■□□□ 1.14
MT-CO3P00414 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO3P00414 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO3P00414 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.18■■□□□ 1.14
MT-CO3P00414 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.17■■□□□ 1.14
MT-CO3P00414 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.17■■□□□ 1.14
MT-CO3P00414 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MT-CO3P00414 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MT-CO3P00414 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.17■■□□□ 1.14
MT-CO3P00414 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
MT-CO3P00414 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MT-CO3P00414 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
MT-CO3P00414 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-CO3P00414 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-CO3P00414 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
MT-CO3P00414 AC097381.1-201ENST00000429019 1296 ntBASIC22.16■■□□□ 1.14
MT-CO3P00414 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-CO3P00414 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.16■■□□□ 1.14
MT-CO3P00414 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms