Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
GGPS1O95749 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.22■■□□□ 1.79
GGPS1O95749 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
GGPS1O95749 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
GGPS1O95749 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
GGPS1O95749 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.21■■□□□ 1.79
GGPS1O95749 AL136116.3-201ENST00000402907 1138 ntBASIC26.21■■□□□ 1.79
GGPS1O95749 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
GGPS1O95749 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
GGPS1O95749 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
GGPS1O95749 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
GGPS1O95749 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
GGPS1O95749 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.2■■□□□ 1.78
GGPS1O95749 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.2■■□□□ 1.78
GGPS1O95749 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
GGPS1O95749 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
GGPS1O95749 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
GGPS1O95749 SLC6A10P-202ENST00000431994 2058 ntBASIC26.19■■□□□ 1.78
GGPS1O95749 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
GGPS1O95749 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.19■■□□□ 1.78
GGPS1O95749 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.19■■□□□ 1.78
GGPS1O95749 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
GGPS1O95749 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.19■■□□□ 1.78
GGPS1O95749 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.19■■□□□ 1.78
GGPS1O95749 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
GGPS1O95749 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
GGPS1O95749 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
GGPS1O95749 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.18■■□□□ 1.78
GGPS1O95749 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
GGPS1O95749 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.18■■□□□ 1.78
GGPS1O95749 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
GGPS1O95749 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
GGPS1O95749 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.18■■□□□ 1.78
GGPS1O95749 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.18■■□□□ 1.78
GGPS1O95749 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.18■■□□□ 1.78
GGPS1O95749 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
GGPS1O95749 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.18■■□□□ 1.78
GGPS1O95749 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
GGPS1O95749 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
GGPS1O95749 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.18■■□□□ 1.78
GGPS1O95749 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
GGPS1O95749 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
GGPS1O95749 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
GGPS1O95749 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
GGPS1O95749 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
GGPS1O95749 MIR4466-201ENST00000606121 54 ntBASIC26.17■■□□□ 1.78
GGPS1O95749 MIR6722-201ENST00000617286 78 ntBASIC26.17■■□□□ 1.78
GGPS1O95749 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
GGPS1O95749 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
GGPS1O95749 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
GGPS1O95749 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
GGPS1O95749 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
GGPS1O95749 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
GGPS1O95749 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
GGPS1O95749 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.16■■□□□ 1.78
GGPS1O95749 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
GGPS1O95749 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
GGPS1O95749 AC145676.1-201ENST00000514988 2004 ntBASIC26.15■■□□□ 1.78
GGPS1O95749 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
GGPS1O95749 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.15■■□□□ 1.78
GGPS1O95749 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.15■■□□□ 1.78
GGPS1O95749 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
GGPS1O95749 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
GGPS1O95749 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.14■■□□□ 1.78
GGPS1O95749 AL512631.2-201ENST00000604634 923 ntBASIC26.14■■□□□ 1.78
GGPS1O95749 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.14■■□□□ 1.78
GGPS1O95749 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
GGPS1O95749 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
GGPS1O95749 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
GGPS1O95749 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.13■■□□□ 1.77
GGPS1O95749 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
GGPS1O95749 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
GGPS1O95749 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.12■■□□□ 1.77
GGPS1O95749 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.12■■□□□ 1.77
GGPS1O95749 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
GGPS1O95749 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
GGPS1O95749 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
GGPS1O95749 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.12■■□□□ 1.77
GGPS1O95749 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.11■■□□□ 1.77
GGPS1O95749 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
GGPS1O95749 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
GGPS1O95749 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
GGPS1O95749 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
GGPS1O95749 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.11■■□□□ 1.77
GGPS1O95749 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.11■■□□□ 1.77
GGPS1O95749 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
GGPS1O95749 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
GGPS1O95749 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
GGPS1O95749 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
GGPS1O95749 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
GGPS1O95749 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
GGPS1O95749 AC004448.1-201ENST00000458332 883 ntBASIC26.1■■□□□ 1.77
GGPS1O95749 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
GGPS1O95749 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
GGPS1O95749 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.1■■□□□ 1.77
GGPS1O95749 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
GGPS1O95749 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
GGPS1O95749 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
GGPS1O95749 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.09■■□□□ 1.77
GGPS1O95749 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms