Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDRT1O95170 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDRT1O95170 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDRT1O95170 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.62■□□□□ 0.89
CDRT1O95170 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDRT1O95170 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CDRT1O95170 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.61■□□□□ 0.89
CDRT1O95170 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDRT1O95170 AC233723.2-201ENST00000623798 2106 ntBASIC20.61■□□□□ 0.89
CDRT1O95170 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDRT1O95170 LINC00565-201ENST00000562710 2331 ntBASIC20.61■□□□□ 0.89
CDRT1O95170 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDRT1O95170 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.61■□□□□ 0.89
CDRT1O95170 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CDRT1O95170 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDRT1O95170 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDRT1O95170 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDRT1O95170 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDRT1O95170 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDRT1O95170 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDRT1O95170 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.6■□□□□ 0.89
CDRT1O95170 CR559946.2-201ENST00000623684 991 ntBASIC20.6■□□□□ 0.89
CDRT1O95170 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.6■□□□□ 0.89
CDRT1O95170 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDRT1O95170 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.6■□□□□ 0.89
CDRT1O95170 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.59■□□□□ 0.89
CDRT1O95170 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.59■□□□□ 0.89
CDRT1O95170 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDRT1O95170 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDRT1O95170 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CDRT1O95170 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDRT1O95170 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDRT1O95170 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CDRT1O95170 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDRT1O95170 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDRT1O95170 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.59■□□□□ 0.89
CDRT1O95170 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDRT1O95170 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDRT1O95170 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CDRT1O95170 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDRT1O95170 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDRT1O95170 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDRT1O95170 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDRT1O95170 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDRT1O95170 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDRT1O95170 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDRT1O95170 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDRT1O95170 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDRT1O95170 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.58■□□□□ 0.89
CDRT1O95170 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
CDRT1O95170 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CDRT1O95170 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.58■□□□□ 0.88
CDRT1O95170 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
CDRT1O95170 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT1O95170 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT1O95170 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT1O95170 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT1O95170 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT1O95170 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT1O95170 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT1O95170 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT1O95170 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT1O95170 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT1O95170 MIR6089-201ENST00000616698 64 ntBASIC20.56■□□□□ 0.88
CDRT1O95170 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT1O95170 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.56■□□□□ 0.88
CDRT1O95170 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT1O95170 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT1O95170 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT1O95170 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT1O95170 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT1O95170 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT1O95170 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT1O95170 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT1O95170 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT1O95170 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT1O95170 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDRT1O95170 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT1O95170 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT1O95170 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT1O95170 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT1O95170 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.55■□□□□ 0.88
CDRT1O95170 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDRT1O95170 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.54■□□□□ 0.88
CDRT1O95170 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CDRT1O95170 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDRT1O95170 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDRT1O95170 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDRT1O95170 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDRT1O95170 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDRT1O95170 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.54■□□□□ 0.88
CDRT1O95170 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDRT1O95170 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT1O95170 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDRT1O95170 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT1O95170 ABHD17AP4-201ENST00000411545 909 ntBASIC20.53■□□□□ 0.88
CDRT1O95170 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.53■□□□□ 0.88
CDRT1O95170 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDRT1O95170 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT1O95170 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms