Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.85■□□□□ 0.61
SCAF4O95104 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCAF4O95104 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCAF4O95104 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCAF4O95104 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCAF4O95104 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCAF4O95104 AC126177.7-201ENST00000547904 679 ntBASIC18.85■□□□□ 0.61
SCAF4O95104 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.85■□□□□ 0.61
SCAF4O95104 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCAF4O95104 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SCAF4O95104 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCAF4O95104 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCAF4O95104 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCAF4O95104 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.84■□□□□ 0.61
SCAF4O95104 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.84■□□□□ 0.61
SCAF4O95104 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCAF4O95104 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCAF4O95104 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.84■□□□□ 0.61
SCAF4O95104 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCAF4O95104 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.84■□□□□ 0.61
SCAF4O95104 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.83■□□□□ 0.61
SCAF4O95104 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.83■□□□□ 0.61
SCAF4O95104 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCAF4O95104 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCAF4O95104 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAF4O95104 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.83■□□□□ 0.6
SCAF4O95104 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SCAF4O95104 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCAF4O95104 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAF4O95104 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCAF4O95104 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCAF4O95104 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.82■□□□□ 0.6
SCAF4O95104 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAF4O95104 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAF4O95104 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCAF4O95104 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAF4O95104 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SCAF4O95104 MIR6089-201ENST00000616698 64 ntBASIC18.82■□□□□ 0.6
SCAF4O95104 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAF4O95104 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAF4O95104 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.82■□□□□ 0.6
SCAF4O95104 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAF4O95104 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAF4O95104 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAF4O95104 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAF4O95104 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAF4O95104 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAF4O95104 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAF4O95104 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.81■□□□□ 0.6
SCAF4O95104 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCAF4O95104 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCAF4O95104 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.81■□□□□ 0.6
SCAF4O95104 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.81■□□□□ 0.6
SCAF4O95104 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAF4O95104 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCAF4O95104 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.8■□□□□ 0.6
SCAF4O95104 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCAF4O95104 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SCAF4O95104 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.8■□□□□ 0.6
SCAF4O95104 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCAF4O95104 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCAF4O95104 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCAF4O95104 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SCAF4O95104 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SCAF4O95104 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SCAF4O95104 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCAF4O95104 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCAF4O95104 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCAF4O95104 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.79■□□□□ 0.6
SCAF4O95104 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.79■□□□□ 0.6
SCAF4O95104 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.79■□□□□ 0.6
SCAF4O95104 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCAF4O95104 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.79■□□□□ 0.6
SCAF4O95104 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCAF4O95104 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.79■□□□□ 0.6
SCAF4O95104 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SCAF4O95104 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SCAF4O95104 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCAF4O95104 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SCAF4O95104 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.79■□□□□ 0.6
SCAF4O95104 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCAF4O95104 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAF4O95104 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.78■□□□□ 0.6
SCAF4O95104 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCAF4O95104 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAF4O95104 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAF4O95104 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.78■□□□□ 0.6
SCAF4O95104 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.78■□□□□ 0.6
SCAF4O95104 AC022413.1-201ENST00000624602 984 ntBASIC18.78■□□□□ 0.6
SCAF4O95104 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.78■□□□□ 0.6
SCAF4O95104 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAF4O95104 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAF4O95104 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAF4O95104 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAF4O95104 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAF4O95104 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SCAF4O95104 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAF4O95104 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAF4O95104 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAF4O95104 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms