Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CTNND1O60716 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.35■■□□□ 1.97
CTNND1O60716 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC27.35■■□□□ 1.97
CTNND1O60716 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
CTNND1O60716 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CTNND1O60716 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC27.35■■□□□ 1.97
CTNND1O60716 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CTNND1O60716 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
CTNND1O60716 SRD5A1P1-201ENST00000442297 786 ntBASIC27.34■■□□□ 1.97
CTNND1O60716 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CTNND1O60716 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.33■■□□□ 1.97
CTNND1O60716 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
CTNND1O60716 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
CTNND1O60716 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC27.33■■□□□ 1.97
CTNND1O60716 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
CTNND1O60716 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CTNND1O60716 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
CTNND1O60716 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CTNND1O60716 AL136162.1-201ENST00000607711 1078 ntBASIC27.32■■□□□ 1.96
CTNND1O60716 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
CTNND1O60716 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CTNND1O60716 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CTNND1O60716 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC27.31■■□□□ 1.96
CTNND1O60716 AC142381.2-201ENST00000566120 298 ntBASIC27.31■■□□□ 1.96
CTNND1O60716 AL031432.3-201ENST00000607698 485 ntBASIC27.31■■□□□ 1.96
CTNND1O60716 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CTNND1O60716 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CTNND1O60716 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CTNND1O60716 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.3■■□□□ 1.96
CTNND1O60716 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CTNND1O60716 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CTNND1O60716 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CTNND1O60716 SUDS3P1-201ENST00000505831 966 ntBASIC27.3■■□□□ 1.96
CTNND1O60716 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
CTNND1O60716 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.3■■□□□ 1.96
CTNND1O60716 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CTNND1O60716 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
CTNND1O60716 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
CTNND1O60716 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CTNND1O60716 AC135279.3-201ENST00000610945 1311 ntBASIC27.29■■□□□ 1.96
CTNND1O60716 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.29■■□□□ 1.96
CTNND1O60716 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CTNND1O60716 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
CTNND1O60716 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CTNND1O60716 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.28■■□□□ 1.96
CTNND1O60716 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CTNND1O60716 GUK1-205ENST00000366722 850 ntTSL 3 BASIC27.28■■□□□ 1.96
CTNND1O60716 ZNRF2P3-201ENST00000424200 374 ntBASIC27.28■■□□□ 1.96
CTNND1O60716 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CTNND1O60716 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CTNND1O60716 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.27■■□□□ 1.96
CTNND1O60716 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.27■■□□□ 1.96
CTNND1O60716 AC005703.6-201ENST00000623265 1329 ntBASIC27.27■■□□□ 1.96
CTNND1O60716 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC27.27■■□□□ 1.96
CTNND1O60716 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CTNND1O60716 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CTNND1O60716 AC092803.2-201ENST00000564287 1899 ntBASIC27.27■■□□□ 1.96
CTNND1O60716 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.27■■□□□ 1.96
CTNND1O60716 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CTNND1O60716 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CTNND1O60716 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CTNND1O60716 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
CTNND1O60716 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
CTNND1O60716 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CTNND1O60716 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CTNND1O60716 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
CTNND1O60716 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CTNND1O60716 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CTNND1O60716 EDA-201ENST00000338901 1233 ntBASIC27.25■■□□□ 1.95
CTNND1O60716 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CTNND1O60716 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.25■■□□□ 1.95
CTNND1O60716 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.25■■□□□ 1.95
CTNND1O60716 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CTNND1O60716 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CTNND1O60716 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC27.24■■□□□ 1.95
CTNND1O60716 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC27.24■■□□□ 1.95
CTNND1O60716 AC024257.2-201ENST00000549699 147 ntBASIC27.24■■□□□ 1.95
CTNND1O60716 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.24■■□□□ 1.95
CTNND1O60716 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CTNND1O60716 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
CTNND1O60716 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CTNND1O60716 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
CTNND1O60716 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC27.23■■□□□ 1.95
CTNND1O60716 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CTNND1O60716 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
CTNND1O60716 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CTNND1O60716 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
CTNND1O60716 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CTNND1O60716 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
CTNND1O60716 AL355001.2-201ENST00000620617 1191 ntBASIC27.22■■□□□ 1.95
CTNND1O60716 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.22■■□□□ 1.95
CTNND1O60716 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CTNND1O60716 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CTNND1O60716 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.21■■□□□ 1.95
CTNND1O60716 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CTNND1O60716 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CTNND1O60716 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CTNND1O60716 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC27.21■■□□□ 1.95
CTNND1O60716 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
CTNND1O60716 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms