Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
NPHS1O60500 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NPHS1O60500 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NPHS1O60500 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NPHS1O60500 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.66■■□□□ 1.22
NPHS1O60500 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NPHS1O60500 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.66■■□□□ 1.22
NPHS1O60500 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.66■■□□□ 1.22
NPHS1O60500 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NPHS1O60500 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
NPHS1O60500 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
NPHS1O60500 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.65■■□□□ 1.22
NPHS1O60500 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NPHS1O60500 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NPHS1O60500 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NPHS1O60500 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.65■■□□□ 1.22
NPHS1O60500 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NPHS1O60500 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.65■■□□□ 1.22
NPHS1O60500 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.65■■□□□ 1.22
NPHS1O60500 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
NPHS1O60500 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
NPHS1O60500 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.63■■□□□ 1.21
NPHS1O60500 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.63■■□□□ 1.21
NPHS1O60500 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NPHS1O60500 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
NPHS1O60500 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.63■■□□□ 1.21
NPHS1O60500 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NPHS1O60500 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.63■■□□□ 1.21
NPHS1O60500 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPHS1O60500 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NPHS1O60500 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPHS1O60500 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPHS1O60500 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPHS1O60500 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.62■■□□□ 1.21
NPHS1O60500 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPHS1O60500 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPHS1O60500 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPHS1O60500 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPHS1O60500 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPHS1O60500 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NPHS1O60500 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPHS1O60500 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPHS1O60500 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NPHS1O60500 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.61■■□□□ 1.21
NPHS1O60500 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.61■■□□□ 1.21
NPHS1O60500 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.61■■□□□ 1.21
NPHS1O60500 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NPHS1O60500 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPHS1O60500 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPHS1O60500 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPHS1O60500 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPHS1O60500 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPHS1O60500 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPHS1O60500 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NPHS1O60500 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPHS1O60500 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPHS1O60500 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
NPHS1O60500 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPHS1O60500 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NPHS1O60500 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPHS1O60500 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPHS1O60500 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPHS1O60500 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
NPHS1O60500 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPHS1O60500 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NPHS1O60500 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NPHS1O60500 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NPHS1O60500 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NPHS1O60500 GPX1-201ENST00000419349 1106 ntBASIC22.58■■□□□ 1.21
NPHS1O60500 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
NPHS1O60500 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NPHS1O60500 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.57■■□□□ 1.2
NPHS1O60500 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPHS1O60500 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPHS1O60500 AC009831.1-201ENST00000580420 1582 ntBASIC22.57■■□□□ 1.2
NPHS1O60500 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPHS1O60500 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPHS1O60500 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.57■■□□□ 1.2
NPHS1O60500 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPHS1O60500 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
NPHS1O60500 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPHS1O60500 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.56■■□□□ 1.2
NPHS1O60500 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
NPHS1O60500 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.56■■□□□ 1.2
NPHS1O60500 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.56■■□□□ 1.2
NPHS1O60500 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NPHS1O60500 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.56■■□□□ 1.2
NPHS1O60500 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
NPHS1O60500 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.55■■□□□ 1.2
NPHS1O60500 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms