Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
MID1O15344 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MID1O15344 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MID1O15344 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MID1O15344 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
MID1O15344 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.38■■□□□ 1.33
MID1O15344 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
MID1O15344 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.38■■□□□ 1.33
MID1O15344 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.38■■□□□ 1.33
MID1O15344 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
MID1O15344 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
MID1O15344 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.38■■□□□ 1.33
MID1O15344 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
MID1O15344 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MID1O15344 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.38■■□□□ 1.33
MID1O15344 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MID1O15344 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MID1O15344 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MID1O15344 AC145676.1-201ENST00000514988 2004 ntBASIC23.37■■□□□ 1.33
MID1O15344 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MID1O15344 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
MID1O15344 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.37■■□□□ 1.33
MID1O15344 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.37■■□□□ 1.33
MID1O15344 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.37■■□□□ 1.33
MID1O15344 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
MID1O15344 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
MID1O15344 MIR4466-201ENST00000606121 54 ntBASIC23.36■■□□□ 1.33
MID1O15344 MIR6722-201ENST00000617286 78 ntBASIC23.36■■□□□ 1.33
MID1O15344 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
MID1O15344 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
MID1O15344 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
MID1O15344 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MID1O15344 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MID1O15344 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.35■■□□□ 1.33
MID1O15344 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.35■■□□□ 1.33
MID1O15344 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MID1O15344 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.35■■□□□ 1.33
MID1O15344 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.35■■□□□ 1.33
MID1O15344 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
MID1O15344 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.34■■□□□ 1.33
MID1O15344 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
MID1O15344 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
MID1O15344 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
MID1O15344 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
MID1O15344 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MID1O15344 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
MID1O15344 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.34■■□□□ 1.33
MID1O15344 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MID1O15344 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.34■■□□□ 1.33
MID1O15344 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
MID1O15344 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
MID1O15344 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
MID1O15344 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.33■■□□□ 1.33
MID1O15344 AL512631.2-201ENST00000604634 923 ntBASIC23.33■■□□□ 1.33
MID1O15344 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
MID1O15344 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MID1O15344 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MID1O15344 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.32■■□□□ 1.32
MID1O15344 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MID1O15344 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MID1O15344 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.31■■□□□ 1.32
MID1O15344 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.31■■□□□ 1.32
MID1O15344 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.31■■□□□ 1.32
MID1O15344 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.31■■□□□ 1.32
MID1O15344 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MID1O15344 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.31■■□□□ 1.32
MID1O15344 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MID1O15344 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
MID1O15344 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.3■■□□□ 1.32
MID1O15344 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MID1O15344 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.3■■□□□ 1.32
MID1O15344 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MID1O15344 AC004448.1-201ENST00000458332 883 ntBASIC23.3■■□□□ 1.32
MID1O15344 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MID1O15344 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MID1O15344 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.3■■□□□ 1.32
MID1O15344 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.3■■□□□ 1.32
MID1O15344 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
MID1O15344 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.3■■□□□ 1.32
MID1O15344 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.3■■□□□ 1.32
MID1O15344 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MID1O15344 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MID1O15344 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MID1O15344 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MID1O15344 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.29■■□□□ 1.32
MID1O15344 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MID1O15344 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.29■■□□□ 1.32
MID1O15344 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.29■■□□□ 1.32
MID1O15344 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MID1O15344 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MID1O15344 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MID1O15344 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
MID1O15344 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MID1O15344 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MID1O15344 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MID1O15344 AL139246.5-201ENST00000606645 996 ntBASIC23.28■■□□□ 1.32
MID1O15344 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.28■■□□□ 1.32
MID1O15344 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
MID1O15344 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.28■■□□□ 1.32
MID1O15344 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms