Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDH17O14917 AC097639.1-201ENST00000565519 1891 ntBASIC22.09■■□□□ 1.13
PCDH17O14917 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH17O14917 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH17O14917 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH17O14917 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH17O14917 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH17O14917 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH17O14917 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH17O14917 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH17O14917 AC239859.2-201ENST00000444165 318 ntBASIC22.08■■□□□ 1.13
PCDH17O14917 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
PCDH17O14917 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH17O14917 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH17O14917 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
PCDH17O14917 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH17O14917 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
PCDH17O14917 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH17O14917 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDH17O14917 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDH17O14917 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDH17O14917 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PCDH17O14917 FOXO3B-201ENST00000395675 1928 ntBASIC22.07■■□□□ 1.12
PCDH17O14917 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH17O14917 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH17O14917 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH17O14917 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH17O14917 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDH17O14917 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH17O14917 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH17O14917 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH17O14917 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH17O14917 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH17O14917 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDH17O14917 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDH17O14917 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
PCDH17O14917 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH17O14917 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH17O14917 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH17O14917 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
PCDH17O14917 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH17O14917 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH17O14917 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH17O14917 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.05■■□□□ 1.12
PCDH17O14917 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH17O14917 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
PCDH17O14917 MIR4281-201ENST00000580852 62 ntBASIC22.05■■□□□ 1.12
PCDH17O14917 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDH17O14917 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH17O14917 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH17O14917 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH17O14917 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDH17O14917 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PCDH17O14917 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH17O14917 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDH17O14917 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH17O14917 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH17O14917 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDH17O14917 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH17O14917 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH17O14917 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH17O14917 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDH17O14917 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PCDH17O14917 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH17O14917 AC131212.1-201ENST00000613771 668 ntBASIC22.03■■□□□ 1.12
PCDH17O14917 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDH17O14917 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH17O14917 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH17O14917 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH17O14917 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDH17O14917 AC021242.3-201ENST00000607598 1377 ntBASIC22.02■■□□□ 1.12
PCDH17O14917 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH17O14917 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH17O14917 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PCDH17O14917 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDH17O14917 MIR4787-201ENST00000607364 84 ntBASIC22.02■■□□□ 1.12
PCDH17O14917 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH17O14917 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH17O14917 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH17O14917 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PCDH17O14917 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH17O14917 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDH17O14917 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
PCDH17O14917 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH17O14917 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH17O14917 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDH17O14917 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH17O14917 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH17O14917 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22■■□□□ 1.11
PCDH17O14917 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH17O14917 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH17O14917 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH17O14917 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH17O14917 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH17O14917 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22■■□□□ 1.11
PCDH17O14917 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22■■□□□ 1.11
PCDH17O14917 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22■■□□□ 1.11
PCDH17O14917 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22■■□□□ 1.11
PCDH17O14917 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22■■□□□ 1.11
PCDH17O14917 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms