Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDX4O14627 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.73■■□□□ 1.23
CDX4O14627 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.73■■□□□ 1.23
CDX4O14627 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDX4O14627 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDX4O14627 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDX4O14627 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDX4O14627 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.72■■□□□ 1.23
CDX4O14627 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDX4O14627 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.72■■□□□ 1.23
CDX4O14627 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.72■■□□□ 1.23
CDX4O14627 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.72■■□□□ 1.23
CDX4O14627 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
CDX4O14627 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDX4O14627 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDX4O14627 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.71■■□□□ 1.23
CDX4O14627 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.71■■□□□ 1.23
CDX4O14627 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.71■■□□□ 1.23
CDX4O14627 AC008764.7-201ENST00000593779 1081 ntBASIC22.71■■□□□ 1.23
CDX4O14627 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDX4O14627 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CDX4O14627 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDX4O14627 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDX4O14627 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CDX4O14627 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.7■■□□□ 1.22
CDX4O14627 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDX4O14627 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.7■■□□□ 1.22
CDX4O14627 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDX4O14627 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.7■■□□□ 1.22
CDX4O14627 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.69■■□□□ 1.22
CDX4O14627 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.69■■□□□ 1.22
CDX4O14627 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDX4O14627 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDX4O14627 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CDX4O14627 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDX4O14627 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.69■■□□□ 1.22
CDX4O14627 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.69■■□□□ 1.22
CDX4O14627 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDX4O14627 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CDX4O14627 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
CDX4O14627 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDX4O14627 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CDX4O14627 AC099791.1-201ENST00000416440 715 ntBASIC22.68■■□□□ 1.22
CDX4O14627 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDX4O14627 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.68■■□□□ 1.22
CDX4O14627 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.68■■□□□ 1.22
CDX4O14627 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.68■■□□□ 1.22
CDX4O14627 AC099791.2-201ENST00000605725 427 ntBASIC22.68■■□□□ 1.22
CDX4O14627 AC011298.3-201ENST00000615796 283 ntBASIC22.68■■□□□ 1.22
CDX4O14627 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.68■■□□□ 1.22
CDX4O14627 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.68■■□□□ 1.22
CDX4O14627 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDX4O14627 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.67■■□□□ 1.22
CDX4O14627 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDX4O14627 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.67■■□□□ 1.22
CDX4O14627 IKBKGP1-201ENST00000612193 1073 ntBASIC22.67■■□□□ 1.22
CDX4O14627 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDX4O14627 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDX4O14627 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CDX4O14627 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.66■■□□□ 1.22
CDX4O14627 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.66■■□□□ 1.22
CDX4O14627 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.66■■□□□ 1.22
CDX4O14627 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDX4O14627 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.66■■□□□ 1.22
CDX4O14627 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.66■■□□□ 1.22
CDX4O14627 AL138724.1-201ENST00000606771 1088 ntBASIC22.66■■□□□ 1.22
CDX4O14627 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDX4O14627 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.65■■□□□ 1.22
CDX4O14627 AC022517.1-201ENST00000592429 346 ntBASIC22.65■■□□□ 1.22
CDX4O14627 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.65■■□□□ 1.22
CDX4O14627 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDX4O14627 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDX4O14627 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDX4O14627 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDX4O14627 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDX4O14627 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDX4O14627 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
CDX4O14627 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDX4O14627 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDX4O14627 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.64■■□□□ 1.21
CDX4O14627 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.63■■□□□ 1.21
CDX4O14627 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDX4O14627 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CDX4O14627 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDX4O14627 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDX4O14627 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDX4O14627 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDX4O14627 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDX4O14627 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDX4O14627 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDX4O14627 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDX4O14627 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDX4O14627 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDX4O14627 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDX4O14627 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDX4O14627 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.62■■□□□ 1.21
CDX4O14627 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.62■■□□□ 1.21
CDX4O14627 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDX4O14627 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDX4O14627 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms