Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NTN3O00634 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
NTN3O00634 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.3■■□□□ 1.16
NTN3O00634 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
NTN3O00634 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NTN3O00634 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
NTN3O00634 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NTN3O00634 AC142381.2-201ENST00000566120 298 ntBASIC22.3■■□□□ 1.16
NTN3O00634 AL136162.1-201ENST00000607711 1078 ntBASIC22.3■■□□□ 1.16
NTN3O00634 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.3■■□□□ 1.16
NTN3O00634 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NTN3O00634 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NTN3O00634 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.29■■□□□ 1.16
NTN3O00634 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.29■■□□□ 1.16
NTN3O00634 ZNRF2P3-201ENST00000424200 374 ntBASIC22.29■■□□□ 1.16
NTN3O00634 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NTN3O00634 SUDS3P1-201ENST00000505831 966 ntBASIC22.29■■□□□ 1.16
NTN3O00634 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.29■■□□□ 1.16
NTN3O00634 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NTN3O00634 AC135279.3-201ENST00000610945 1311 ntBASIC22.29■■□□□ 1.16
NTN3O00634 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NTN3O00634 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NTN3O00634 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
NTN3O00634 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NTN3O00634 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NTN3O00634 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NTN3O00634 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NTN3O00634 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.28■■□□□ 1.16
NTN3O00634 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
NTN3O00634 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.27■■□□□ 1.16
NTN3O00634 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
NTN3O00634 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
NTN3O00634 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
NTN3O00634 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
NTN3O00634 EDA-201ENST00000338901 1233 ntBASIC22.26■■□□□ 1.15
NTN3O00634 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NTN3O00634 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.26■■□□□ 1.15
NTN3O00634 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.26■■□□□ 1.15
NTN3O00634 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NTN3O00634 AC005703.6-201ENST00000623265 1329 ntBASIC22.26■■□□□ 1.15
NTN3O00634 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
NTN3O00634 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NTN3O00634 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.25■■□□□ 1.15
NTN3O00634 AC024257.2-201ENST00000549699 147 ntBASIC22.25■■□□□ 1.15
NTN3O00634 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.25■■□□□ 1.15
NTN3O00634 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.25■■□□□ 1.15
NTN3O00634 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NTN3O00634 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NTN3O00634 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NTN3O00634 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NTN3O00634 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
NTN3O00634 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
NTN3O00634 AC092803.2-201ENST00000564287 1899 ntBASIC22.24■■□□□ 1.15
NTN3O00634 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NTN3O00634 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
NTN3O00634 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
NTN3O00634 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NTN3O00634 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
NTN3O00634 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
NTN3O00634 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.23■■□□□ 1.15
NTN3O00634 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.23■■□□□ 1.15
NTN3O00634 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NTN3O00634 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NTN3O00634 AL355001.2-201ENST00000620617 1191 ntBASIC22.23■■□□□ 1.15
NTN3O00634 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NTN3O00634 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NTN3O00634 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NTN3O00634 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NTN3O00634 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NTN3O00634 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NTN3O00634 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.22■■□□□ 1.15
NTN3O00634 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
NTN3O00634 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.22■■□□□ 1.15
NTN3O00634 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NTN3O00634 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NTN3O00634 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.22■■□□□ 1.15
NTN3O00634 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
NTN3O00634 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NTN3O00634 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NTN3O00634 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NTN3O00634 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
NTN3O00634 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NTN3O00634 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NTN3O00634 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NTN3O00634 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NTN3O00634 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NTN3O00634 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.21■■□□□ 1.15
NTN3O00634 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NTN3O00634 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.21■■□□□ 1.15
NTN3O00634 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.21■■□□□ 1.15
NTN3O00634 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NTN3O00634 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NTN3O00634 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.21■■□□□ 1.15
NTN3O00634 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.2■■□□□ 1.14
NTN3O00634 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NTN3O00634 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
NTN3O00634 DUX4L19-201ENST00000557448 1267 ntBASIC22.2■■□□□ 1.14
NTN3O00634 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
NTN3O00634 RARRES2P6-201ENST00000567333 442 ntBASIC22.2■■□□□ 1.14
NTN3O00634 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms