Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL21O00585 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL21O00585 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCL21O00585 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.65■□□□□ 0.9
CCL21O00585 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.65■□□□□ 0.9
CCL21O00585 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCL21O00585 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCL21O00585 AC005703.6-201ENST00000623265 1329 ntBASIC20.65■□□□□ 0.9
CCL21O00585 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL21O00585 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.65■□□□□ 0.9
CCL21O00585 AC004448.1-201ENST00000458332 883 ntBASIC20.65■□□□□ 0.9
CCL21O00585 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.65■□□□□ 0.9
CCL21O00585 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CCL21O00585 AL136967.2-201ENST00000623968 743 ntBASIC20.65■□□□□ 0.9
CCL21O00585 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL21O00585 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.64■□□□□ 0.9
CCL21O00585 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL21O00585 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL21O00585 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.63■□□□□ 0.89
CCL21O00585 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCL21O00585 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL21O00585 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL21O00585 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCL21O00585 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL21O00585 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL21O00585 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL21O00585 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL21O00585 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.62■□□□□ 0.89
CCL21O00585 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCL21O00585 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.62■□□□□ 0.89
CCL21O00585 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL21O00585 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL21O00585 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL21O00585 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL21O00585 SYT6-210ENST00000641643 1587 ntBASIC20.61■□□□□ 0.89
CCL21O00585 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.61■□□□□ 0.89
CCL21O00585 AC092171.4-201ENST00000609130 632 ntBASIC20.61■□□□□ 0.89
CCL21O00585 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.61■□□□□ 0.89
CCL21O00585 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL21O00585 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL21O00585 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL21O00585 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.6■□□□□ 0.89
CCL21O00585 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.6■□□□□ 0.89
CCL21O00585 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL21O00585 MIR939-201ENST00000401314 82 ntBASIC20.6■□□□□ 0.89
CCL21O00585 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL21O00585 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.6■□□□□ 0.89
CCL21O00585 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL21O00585 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.6■□□□□ 0.89
CCL21O00585 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL21O00585 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL21O00585 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL21O00585 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCL21O00585 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
CCL21O00585 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCL21O00585 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL21O00585 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CCL21O00585 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL21O00585 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL21O00585 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.59■□□□□ 0.89
CCL21O00585 AP001330.3-201ENST00000520123 633 ntBASIC20.59■□□□□ 0.89
CCL21O00585 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL21O00585 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL21O00585 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL21O00585 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCL21O00585 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL21O00585 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCL21O00585 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCL21O00585 AC096887.2-201ENST00000623443 1957 ntBASIC20.58■□□□□ 0.89
CCL21O00585 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.89
CCL21O00585 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.58■□□□□ 0.89
CCL21O00585 AC091305.1-201ENST00000479476 895 ntBASIC20.58■□□□□ 0.89
CCL21O00585 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.89
CCL21O00585 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCL21O00585 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.58■□□□□ 0.89
CCL21O00585 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.58■□□□□ 0.89
CCL21O00585 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCL21O00585 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCL21O00585 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCL21O00585 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CCL21O00585 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL21O00585 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL21O00585 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL21O00585 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.57■□□□□ 0.88
CCL21O00585 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCL21O00585 ERN1-208ENST00000606895 2068 ntBASIC20.57■□□□□ 0.88
CCL21O00585 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL21O00585 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL21O00585 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL21O00585 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL21O00585 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL21O00585 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.56■□□□□ 0.88
CCL21O00585 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.56■□□□□ 0.88
CCL21O00585 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.56■□□□□ 0.88
CCL21O00585 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL21O00585 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL21O00585 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL21O00585 MIR4767-201ENST00000582827 78 ntBASIC20.55■□□□□ 0.88
CCL21O00585 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.55■□□□□ 0.88
CCL21O00585 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms