Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.13■□□□□ 0.97
NPIPA2E9PIF3 AC010997.5-201ENST00000609182 354 ntBASIC21.13■□□□□ 0.97
NPIPA2E9PIF3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPIPA2E9PIF3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 MTDHP2-201ENST00000601468 714 ntBASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 AC020928.2-201ENST00000588717 2197 ntBASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPIPA2E9PIF3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.08■□□□□ 0.97
NPIPA2E9PIF3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPIPA2E9PIF3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.08■□□□□ 0.97
NPIPA2E9PIF3 AF131216.4-201ENST00000638924 1588 ntBASIC21.08■□□□□ 0.97
NPIPA2E9PIF3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NPIPA2E9PIF3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NPIPA2E9PIF3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 AC090877.2-201ENST00000558441 1738 ntBASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 AC019069.1-201ENST00000610008 1333 ntBASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 SLC6A10P-202ENST00000431994 2058 ntBASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 MIR6724-1-201ENST00000616420 92 ntBASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 MIR6724-2-201ENST00000616483 92 ntBASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 MIR6724-4-201ENST00000617390 92 ntBASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 MIR6724-3-201ENST00000622482 92 ntBASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms