Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SBNO1A3KN83 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
SBNO1A3KN83 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.98■■■□□ 2.71
SBNO1A3KN83 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SBNO1A3KN83 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.97■■■□□ 2.71
SBNO1A3KN83 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
SBNO1A3KN83 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
SBNO1A3KN83 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.96■■■□□ 2.71
SBNO1A3KN83 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SBNO1A3KN83 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.95■■■□□ 2.71
SBNO1A3KN83 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
SBNO1A3KN83 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SBNO1A3KN83 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SBNO1A3KN83 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
SBNO1A3KN83 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.94■■■□□ 2.7
SBNO1A3KN83 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SBNO1A3KN83 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
SBNO1A3KN83 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SBNO1A3KN83 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SBNO1A3KN83 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.94■■■□□ 2.7
SBNO1A3KN83 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.94■■■□□ 2.7
SBNO1A3KN83 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.93■■■□□ 2.7
SBNO1A3KN83 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.93■■■□□ 2.7
SBNO1A3KN83 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SBNO1A3KN83 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SBNO1A3KN83 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
SBNO1A3KN83 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SBNO1A3KN83 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SBNO1A3KN83 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SBNO1A3KN83 AC004448.1-201ENST00000458332 883 ntBASIC31.92■■■□□ 2.7
SBNO1A3KN83 AC087623.3-201ENST00000607047 1098 ntBASIC31.92■■■□□ 2.7
SBNO1A3KN83 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.91■■■□□ 2.7
SBNO1A3KN83 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SBNO1A3KN83 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
SBNO1A3KN83 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC31.91■■■□□ 2.7
SBNO1A3KN83 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SBNO1A3KN83 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.91■■■□□ 2.7
SBNO1A3KN83 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
SBNO1A3KN83 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.91■■■□□ 2.7
SBNO1A3KN83 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
SBNO1A3KN83 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SBNO1A3KN83 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.9■■■□□ 2.7
SBNO1A3KN83 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
SBNO1A3KN83 AL162430.1-201ENST00000480705 870 ntBASIC31.9■■■□□ 2.7
SBNO1A3KN83 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SBNO1A3KN83 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.9■■■□□ 2.7
SBNO1A3KN83 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.89■■■□□ 2.7
SBNO1A3KN83 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.89■■■□□ 2.7
SBNO1A3KN83 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SBNO1A3KN83 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
SBNO1A3KN83 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.89■■■□□ 2.7
SBNO1A3KN83 MIR4767-201ENST00000582827 78 ntBASIC31.89■■■□□ 2.7
SBNO1A3KN83 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
SBNO1A3KN83 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.88■■■□□ 2.69
SBNO1A3KN83 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC31.88■■■□□ 2.69
SBNO1A3KN83 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.88■■■□□ 2.69
SBNO1A3KN83 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
SBNO1A3KN83 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.88■■■□□ 2.69
SBNO1A3KN83 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SBNO1A3KN83 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SBNO1A3KN83 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.86■■■□□ 2.69
SBNO1A3KN83 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SBNO1A3KN83 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
SBNO1A3KN83 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.86■■■□□ 2.69
SBNO1A3KN83 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
SBNO1A3KN83 CA15P2-201ENST00000611168 834 ntBASIC31.86■■■□□ 2.69
SBNO1A3KN83 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SBNO1A3KN83 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.86■■■□□ 2.69
SBNO1A3KN83 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SBNO1A3KN83 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC31.85■■■□□ 2.69
SBNO1A3KN83 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SBNO1A3KN83 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SBNO1A3KN83 RASA4CP-201ENST00000424092 1398 ntBASIC31.85■■■□□ 2.69
SBNO1A3KN83 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
SBNO1A3KN83 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SBNO1A3KN83 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.84■■■□□ 2.69
SBNO1A3KN83 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SBNO1A3KN83 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.84■■■□□ 2.69
SBNO1A3KN83 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SBNO1A3KN83 SYT6-210ENST00000641643 1587 ntBASIC31.84■■■□□ 2.69
SBNO1A3KN83 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SBNO1A3KN83 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SBNO1A3KN83 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.83■■■□□ 2.69
SBNO1A3KN83 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SBNO1A3KN83 MAG-206ENST00000597035 542 ntTSL 4 BASIC31.82■■■□□ 2.69
SBNO1A3KN83 AC092171.4-201ENST00000609130 632 ntBASIC31.82■■■□□ 2.69
SBNO1A3KN83 AC005703.6-201ENST00000623265 1329 ntBASIC31.82■■■□□ 2.68
SBNO1A3KN83 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SBNO1A3KN83 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
SBNO1A3KN83 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.81■■■□□ 2.68
SBNO1A3KN83 AC027682.1-201ENST00000562846 899 ntBASIC31.81■■■□□ 2.68
SBNO1A3KN83 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.8■■■□□ 2.68
SBNO1A3KN83 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SBNO1A3KN83 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
SBNO1A3KN83 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.8■■■□□ 2.68
SBNO1A3KN83 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC31.8■■■□□ 2.68
SBNO1A3KN83 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
SBNO1A3KN83 SERBP1P1-201ENST00000396021 1160 ntBASIC31.8■■■□□ 2.68
SBNO1A3KN83 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.8■■■□□ 2.68
SBNO1A3KN83 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms