Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV13-2A0A0B4J235 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-2A0A0B4J235 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-2A0A0B4J235 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-2A0A0B4J235 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV13-2A0A0B4J235 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-2A0A0B4J235 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV13-2A0A0B4J235 CAHM-201ENST00000604200 896 ntBASIC15.29■□□□□ 0.04
TRAV13-2A0A0B4J235 MIR6090-201ENST00000622481 60 ntBASIC15.29■□□□□ 0.04
TRAV13-2A0A0B4J235 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-2A0A0B4J235 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-2A0A0B4J235 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV13-2A0A0B4J235 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-2A0A0B4J235 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV13-2A0A0B4J235 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.27■□□□□ 0.04
TRAV13-2A0A0B4J235 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRAV13-2A0A0B4J235 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV13-2A0A0B4J235 AC127496.7-201ENST00000625110 1798 ntBASIC15.27■□□□□ 0.04
TRAV13-2A0A0B4J235 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV13-2A0A0B4J235 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV13-2A0A0B4J235 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV13-2A0A0B4J235 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-2A0A0B4J235 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-2A0A0B4J235 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-2A0A0B4J235 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-2A0A0B4J235 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-2A0A0B4J235 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TRAV13-2A0A0B4J235 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-2A0A0B4J235 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-2A0A0B4J235 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-2A0A0B4J235 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 EP400NL-214ENST00000641289 2402 ntBASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 RPS2-210ENST00000530225 765 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV13-2A0A0B4J235 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV13-2A0A0B4J235 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
TRAV13-2A0A0B4J235 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV13-2A0A0B4J235 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV13-2A0A0B4J235 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-2A0A0B4J235 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-2A0A0B4J235 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV13-2A0A0B4J235 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV13-2A0A0B4J235 AC137767.1-201ENST00000602918 1920 ntBASIC15.25■□□□□ 0.03
TRAV13-2A0A0B4J235 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAV13-2A0A0B4J235 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-2A0A0B4J235 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms