Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV27A0A087WT01 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAV27A0A087WT01 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV27A0A087WT01 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRAV27A0A087WT01 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAV27A0A087WT01 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21■□□□□ 0.95
TRAV27A0A087WT01 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
TRAV27A0A087WT01 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21■□□□□ 0.95
TRAV27A0A087WT01 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TRAV27A0A087WT01 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRAV27A0A087WT01 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TRAV27A0A087WT01 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV27A0A087WT01 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV27A0A087WT01 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRAV27A0A087WT01 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV27A0A087WT01 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRAV27A0A087WT01 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV27A0A087WT01 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV27A0A087WT01 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV27A0A087WT01 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV27A0A087WT01 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV27A0A087WT01 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRAV27A0A087WT01 DUX4L9-201ENST00000449051 1259 ntBASIC20.99■□□□□ 0.95
TRAV27A0A087WT01 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAV27A0A087WT01 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV27A0A087WT01 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV27A0A087WT01 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAV27A0A087WT01 HSD17B1P1-201ENST00000590052 955 ntBASIC20.98■□□□□ 0.95
TRAV27A0A087WT01 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAV27A0A087WT01 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV27A0A087WT01 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV27A0A087WT01 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAV27A0A087WT01 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 MIR6765-201ENST00000614092 87 ntBASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRAV27A0A087WT01 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV27A0A087WT01 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAV27A0A087WT01 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRAV27A0A087WT01 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAV27A0A087WT01 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV27A0A087WT01 AC087393.1-201ENST00000582896 145 ntBASIC20.96■□□□□ 0.95
TRAV27A0A087WT01 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV27A0A087WT01 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV27A0A087WT01 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV27A0A087WT01 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV27A0A087WT01 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAV27A0A087WT01 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.95■□□□□ 0.94
TRAV27A0A087WT01 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAV27A0A087WT01 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRAV27A0A087WT01 U85056.1-201ENST00000616429 682 ntBASIC20.95■□□□□ 0.94
TRAV27A0A087WT01 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV27A0A087WT01 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV27A0A087WT01 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV27A0A087WT01 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAV27A0A087WT01 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV27A0A087WT01 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.94■□□□□ 0.94
TRAV27A0A087WT01 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV27A0A087WT01 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAV27A0A087WT01 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAV27A0A087WT01 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV27A0A087WT01 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRAV27A0A087WT01 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV27A0A087WT01 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV27A0A087WT01 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
TRAV27A0A087WT01 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV27A0A087WT01 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV27A0A087WT01 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV27A0A087WT01 AC090877.2-201ENST00000558441 1738 ntBASIC20.92■□□□□ 0.94
TRAV27A0A087WT01 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms