Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC093726.1-201ENST00000608064 963 ntBASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 MIR8072-201ENST00000614241 80 ntBASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI2Q9Y5P3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 AC022210.1-201ENST00000449856 793 ntBASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 FAM8A2P-201ENST00000528813 1142 ntBASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 AC123567.1-201ENST00000548294 1261 ntBASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 MIR4525-201ENST00000580000 75 ntBASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 AC025181.2-201ENST00000606994 802 ntBASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 PPT1-215ENST00000641471 2368 ntBASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI2Q9Y5P3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
RAI2Q9Y5P3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.71■□□□□ 0.1
RAI2Q9Y5P3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAI2Q9Y5P3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
RAI2Q9Y5P3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.71■□□□□ 0.1
RAI2Q9Y5P3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 RPL5P21-201ENST00000404620 815 ntBASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 AC104596.2-201ENST00000512793 793 ntBASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 AC092552.1-201ENST00000547243 906 ntBASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 AC007431.3-201ENST00000623221 587 ntBASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms