Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 AC084364.1-201ENST00000551967 1556 ntBASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 AC099398.1-201ENST00000567919 2776 ntBASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 SLC25A24P2-201ENST00000415059 510 ntBASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 FAM8A4P-201ENST00000435433 1213 ntBASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 AL096828.3-201ENST00000615354 462 ntBASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 KRT8P14-201ENST00000414254 1442 ntBASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.6■□□□□ 0.25
PCDHB7Q9Y5E2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 AC112504.1-201ENST00000623415 1841 ntBASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 PCDH8P1-201ENST00000428983 2773 ntBASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms