Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 AC132872.4-202ENST00000622924 2756 ntBASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX2IPQ9Y2D8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 ANKRD19P-201ENST00000338192 862 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 BAATP1-201ENST00000412284 1225 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 BCRP2-202ENST00000447763 634 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 BNIP3P42-201ENST00000454982 569 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 BCRP6-201ENST00000510112 632 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 BCRP7-201ENST00000511549 544 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 RNA5SP412-201ENST00000516234 123 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AP001889.1-201ENST00000525414 633 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AC079316.1-201ENST00000548397 411 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 HNRNPUP1-201ENST00000554987 333 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 BNIP3P29-201ENST00000598302 571 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AC011447.5-201ENST00000616168 564 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AC005052.1-201ENST00000625181 2492 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 AL161772.1-201ENST00000610494 4412 ntBASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX2IPQ9Y2D8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 FAM21FP-201ENST00000426241 1131 ntBASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 KRT18P64-201ENST00000434946 1219 ntBASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 RPL7P3-201ENST00000441388 714 ntBASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms