Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 AC126365.1-201ENST00000578585 1514 ntBASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 AC087481.3-201ENST00000602886 1894 ntBASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 AC079178.1-201ENST00000420915 656 ntBASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 AC108725.1-201ENST00000495472 409 ntBASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 AL513477.1-201ENST00000602865 2407 ntBASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SYNPO2Q9UMS6 KRT8P44-201ENST00000441609 1350 ntBASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 AC020907.1-201ENST00000616460 1350 ntBASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 AC092850.2-201ENST00000623821 2697 ntBASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 BTBD6P1-201ENST00000412176 1267 ntBASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 AC022494.1-201ENST00000466044 728 ntBASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 COX5BP1-201ENST00000507622 393 ntBASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 CLUHP2-201ENST00000426660 1303 ntBASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.66■□□□□ 0.42
SYNPO2Q9UMS6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 REXO1L5P-201ENST00000622260 2098 ntBASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 AP000593.2-201ENST00000542775 1433 ntBASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPO2Q9UMS6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms