Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.59■□□□□ 0.41
HDAC6Q9UBN7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 PDIA3P1-201ENST00000471856 1510 ntBASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
HDAC6Q9UBN7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.58■□□□□ 0.4
HDAC6Q9UBN7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 CTBP2P5-201ENST00000454986 1264 ntBASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 AC069224.1-201ENST00000566372 1715 ntBASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 REXO1L1P-202ENST00000608646 1974 ntBASIC17.57■□□□□ 0.4
HDAC6Q9UBN7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 AP001282.1-201ENST00000531301 1499 ntBASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 AC093525.8-201ENST00000624099 1342 ntBASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms