Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 SLC25A39P2-201ENST00000537614 270 ntBASIC13□□□□□ -0.33
LIN7CQ9NUP9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 MIR4313-201ENST00000580760 101 ntBASIC13□□□□□ -0.33
LIN7CQ9NUP9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AL450472.2-201ENST00000603663 1156 ntBASIC13□□□□□ -0.33
LIN7CQ9NUP9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 FAM220BP-201ENST00000377689 816 ntBASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 TSEN15P1-201ENST00000423257 515 ntBASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 AC093520.2-201ENST00000561830 333 ntBASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 AC027612.4-201ENST00000605371 583 ntBASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIN7CQ9NUP9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms