Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 MIR33B-201ENST00000385104 96 ntBASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 AC104457.1-201ENST00000401024 814 ntBASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 CD8B2-202ENST00000417670 633 ntBASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 HSPB1P2-201ENST00000448722 546 ntBASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 AC126915.1-201ENST00000522847 1038 ntBASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM7Q9NR12 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 AL645728.2-202ENST00000641679 227 ntBASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms