Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 DMBT1P1-203ENST00000636837 4628 ntBASIC14.24□□□□□ -0.13
HMG20AQ9NP66 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 KRT18P56-201ENST00000507275 550 ntBASIC14.23□□□□□ -0.13
HMG20AQ9NP66 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 MPDU1-223ENST00000582151 728 ntBASIC14.23□□□□□ -0.13
HMG20AQ9NP66 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 REXO1L3P-201ENST00000622202 1288 ntBASIC14.23□□□□□ -0.13
HMG20AQ9NP66 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.23□□□□□ -0.13
HMG20AQ9NP66 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 HAUS4P1-201ENST00000406739 1145 ntBASIC14.22□□□□□ -0.13
HMG20AQ9NP66 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 AC073648.2-201ENST00000510116 352 ntBASIC14.22□□□□□ -0.13
HMG20AQ9NP66 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 OR7E14P-202ENST00000530490 1290 ntBASIC14.22□□□□□ -0.13
HMG20AQ9NP66 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 AC091167.2-201ENST00000579581 588 ntBASIC14.22□□□□□ -0.13
HMG20AQ9NP66 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms