Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 DOC2GP-202ENST00000514950 1163 ntBASIC13.34□□□□□ -0.27
GCM1Q9NP62 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 AF228730.6-201ENST00000641497 218 ntBASIC13.34□□□□□ -0.27
GCM1Q9NP62 AC084121.3-201ENST00000641716 218 ntBASIC13.34□□□□□ -0.27
GCM1Q9NP62 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 AC022188.1-201ENST00000620960 1664 ntBASIC13.34□□□□□ -0.27
GCM1Q9NP62 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.33□□□□□ -0.27
GCM1Q9NP62 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
GCM1Q9NP62 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.33□□□□□ -0.27
GCM1Q9NP62 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
GCM1Q9NP62 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 AC015922.1-201ENST00000421102 1152 ntBASIC13.33□□□□□ -0.28
GCM1Q9NP62 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 TERF1P3-201ENST00000505638 1227 ntBASIC13.33□□□□□ -0.28
GCM1Q9NP62 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 SLED1-202ENST00000512051 380 ntBASIC13.33□□□□□ -0.28
GCM1Q9NP62 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 AC004233.3-201ENST00000607794 1269 ntBASIC13.33□□□□□ -0.28
GCM1Q9NP62 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
GCM1Q9NP62 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GCM1Q9NP62 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 SPDYE19P-201ENST00000338590 713 ntBASIC13.32□□□□□ -0.28
GCM1Q9NP62 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 GNAQP1-201ENST00000444815 1067 ntBASIC13.32□□□□□ -0.28
GCM1Q9NP62 AL589987.1-201ENST00000453380 819 ntBASIC13.32□□□□□ -0.28
GCM1Q9NP62 MEIS3P1-201ENST00000495167 958 ntBASIC13.32□□□□□ -0.28
GCM1Q9NP62 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms