Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 AC068137.2-201ENST00000605408 478 ntBASIC19.16■□□□□ 0.66
UPF2Q9HAU5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 KRT19P2-202ENST00000557173 1012 ntBASIC19.15■□□□□ 0.66
UPF2Q9HAU5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 AC116407.3-201ENST00000623905 1129 ntBASIC19.15■□□□□ 0.66
UPF2Q9HAU5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 CICP14-201ENST00000629111 2732 ntBASIC19.15■□□□□ 0.66
UPF2Q9HAU5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 CYP4F24P-201ENST00000586049 1580 ntBASIC19.15■□□□□ 0.66
UPF2Q9HAU5 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF2Q9HAU5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UPF2Q9HAU5 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UPF2Q9HAU5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UPF2Q9HAU5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UPF2Q9HAU5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC19.14■□□□□ 0.66
UPF2Q9HAU5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 CTBP1-AS2-206ENST00000581398 5652 ntBASIC19.14■□□□□ 0.65
UPF2Q9HAU5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 AC079776.4-201ENST00000511039 504 ntBASIC19.14■□□□□ 0.65
UPF2Q9HAU5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 RARRES2P8-201ENST00000566335 367 ntBASIC19.14■□□□□ 0.65
UPF2Q9HAU5 AL049840.3-201ENST00000602669 611 ntBASIC19.14■□□□□ 0.65
UPF2Q9HAU5 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 AC140479.7-201ENST00000636301 2332 ntBASIC19.14■□□□□ 0.65
UPF2Q9HAU5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF2Q9HAU5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms