Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PIF1Q9H611 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.94□□□□□ -0.02
PIF1Q9H611 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 AL390755.1-201ENST00000623716 2027 ntBASIC14.94□□□□□ -0.02
PIF1Q9H611 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.94□□□□□ -0.02
PIF1Q9H611 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 AC007967.2-201ENST00000432613 625 ntBASIC14.94□□□□□ -0.02
PIF1Q9H611 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 AC024267.1-201ENST00000582320 895 ntBASIC14.94□□□□□ -0.02
PIF1Q9H611 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.94□□□□□ -0.02
PIF1Q9H611 AC140113.2-201ENST00000604370 208 ntBASIC14.94□□□□□ -0.02
PIF1Q9H611 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PIF1Q9H611 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PIF1Q9H611 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PIF1Q9H611 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.93□□□□□ -0.02
PIF1Q9H611 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 MIR574-201ENST00000385209 96 ntBASIC14.93□□□□□ -0.02
PIF1Q9H611 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 RNA5SP410-201ENST00000516285 106 ntBASIC14.93□□□□□ -0.02
PIF1Q9H611 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 LINC01922-201ENST00000562582 719 ntBASIC14.93□□□□□ -0.02
PIF1Q9H611 AC040169.1-201ENST00000565382 521 ntBASIC14.93□□□□□ -0.02
PIF1Q9H611 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.93□□□□□ -0.02
PIF1Q9H611 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.93□□□□□ -0.02
PIF1Q9H611 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PIF1Q9H611 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms