Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM2Q9C040 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM2Q9C040 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM2Q9C040 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM2Q9C040 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM2Q9C040 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM2Q9C040 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM2Q9C040 AC148477.4-201ENST00000613430 1793 ntBASIC14.37□□□□□ -0.11
TRIM2Q9C040 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM2Q9C040 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 TARDBPP1-201ENST00000442013 1203 ntBASIC14.36□□□□□ -0.11
TRIM2Q9C040 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 AC069262.1-201ENST00000539058 672 ntBASIC14.36□□□□□ -0.11
TRIM2Q9C040 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 AC005498.2-205ENST00000593218 784 ntBASIC14.36□□□□□ -0.11
TRIM2Q9C040 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM2Q9C040 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM2Q9C040 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 AC051619.7-201ENST00000568314 623 ntBASIC14.35□□□□□ -0.11
TRIM2Q9C040 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 AL096865.1-201ENST00000606796 927 ntBASIC14.35□□□□□ -0.11
TRIM2Q9C040 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 TUBB3P1-201ENST00000405796 1332 ntBASIC14.35□□□□□ -0.11
TRIM2Q9C040 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM2Q9C040 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRIM2Q9C040 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms