Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AC140479.7-201ENST00000636301 2332 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AP001282.1-201ENST00000531301 1499 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AC041040.2-201ENST00000622926 2899 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ZBED1P1-201ENST00000502364 1930 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AL137784.3-201ENST00000623858 2288 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SLC22A20-204ENST00000530038 1673 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AR-208ENST00000612452 10676 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms