Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
THUMPD3Q9BV44 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THUMPD3Q9BV44 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.95□□□□□ -0.02
THUMPD3Q9BV44 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.95□□□□□ -0.02
THUMPD3Q9BV44 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 HTR5BP-201ENST00000430851 1154 ntBASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 SPDYE11-202ENST00000450699 704 ntBASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 ALG1L5P-201ENST00000482043 771 ntBASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 SPDYE9P-201ENST00000570642 692 ntBASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 AC027307.2-201ENST00000591252 911 ntBASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 SPDYE10P-202ENST00000612005 668 ntBASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 SPDYE8P-202ENST00000612377 668 ntBASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 LINC00552-201ENST00000625151 2579 ntBASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 MROH4P-201ENST00000431302 1578 ntBASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THUMPD3Q9BV44 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 AC232323.1-201ENST00000540724 2099 ntBASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 REXO1L5P-201ENST00000622260 2098 ntBASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 MKNK2P1-201ENST00000437526 628 ntBASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 ACTG1P14-201ENST00000446382 1122 ntBASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 DNAJB3-201ENST00000446806 729 ntBASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.93□□□□□ -0.02
THUMPD3Q9BV44 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms