Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.16□□□□□ -0.46
TRGV9Q99603 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.16□□□□□ -0.46
TRGV9Q99603 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
TRGV9Q99603 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TRGV9Q99603 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.16□□□□□ -0.46
TRGV9Q99603 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.16□□□□□ -0.46
TRGV9Q99603 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TRGV9Q99603 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.16□□□□□ -0.46
TRGV9Q99603 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV9Q99603 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV9Q99603 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 REXO1L2P-201ENST00000425429 2069 ntBASIC12.15□□□□□ -0.46
TRGV9Q99603 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV9Q99603 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.15□□□□□ -0.46
TRGV9Q99603 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 AC007326.2-201ENST00000624224 7579 ntBASIC12.15□□□□□ -0.46
TRGV9Q99603 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TRGV9Q99603 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TRGV9Q99603 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TRGV9Q99603 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TRGV9Q99603 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.15□□□□□ -0.46
TRGV9Q99603 HTR5BP-201ENST00000430851 1154 ntBASIC12.15□□□□□ -0.46
TRGV9Q99603 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV9Q99603 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.15□□□□□ -0.46
TRGV9Q99603 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.15□□□□□ -0.46
TRGV9Q99603 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.15□□□□□ -0.46
TRGV9Q99603 BANF1P1-201ENST00000553684 263 ntBASIC12.15□□□□□ -0.46
TRGV9Q99603 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.15□□□□□ -0.46
TRGV9Q99603 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
TRGV9Q99603 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.15□□□□□ -0.46
TRGV9Q99603 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV9Q99603 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
TRGV9Q99603 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TRGV9Q99603 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.15□□□□□ -0.46
TRGV9Q99603 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV9Q99603 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TRGV9Q99603 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV9Q99603 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.15□□□□□ -0.47
TRGV9Q99603 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.15□□□□□ -0.47
TRGV9Q99603 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
TRGV9Q99603 CICP11-201ENST00000434745 2827 ntBASIC12.15□□□□□ -0.47
TRGV9Q99603 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV9Q99603 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV9Q99603 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 ACE3P-201ENST00000423435 1973 ntBASIC12.14□□□□□ -0.47
TRGV9Q99603 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TRGV9Q99603 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV9Q99603 AC007191.1-201ENST00000623179 2995 ntBASIC12.14□□□□□ -0.47
TRGV9Q99603 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TRGV9Q99603 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRGV9Q99603 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV9Q99603 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
TRGV9Q99603 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV9Q99603 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV9Q99603 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV9Q99603 AC005237.2-201ENST00000434368 219 ntBASIC12.14□□□□□ -0.47
TRGV9Q99603 TARDBPP1-201ENST00000442013 1203 ntBASIC12.14□□□□□ -0.47
TRGV9Q99603 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.14□□□□□ -0.47
TRGV9Q99603 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.14□□□□□ -0.47
TRGV9Q99603 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV9Q99603 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.14□□□□□ -0.47
TRGV9Q99603 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
TRGV9Q99603 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms