Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 SPDYE12P-201ENST00000618416 771 ntBASIC14.76□□□□□ -0.05
COL21A1Q96P44 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 TCAF2P1-201ENST00000291129 2421 ntBASIC14.76□□□□□ -0.05
COL21A1Q96P44 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 KRT8P12-202ENST00000472924 1397 ntBASIC14.75□□□□□ -0.05
COL21A1Q96P44 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 TREML5P-201ENST00000421694 576 ntBASIC14.75□□□□□ -0.05
COL21A1Q96P44 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 AC027369.6-201ENST00000525520 931 ntBASIC14.75□□□□□ -0.05
COL21A1Q96P44 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 AL138828.2-201ENST00000615812 383 ntBASIC14.75□□□□□ -0.05
COL21A1Q96P44 AC005089.1-201ENST00000619486 2241 ntBASIC14.75□□□□□ -0.05
COL21A1Q96P44 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.75□□□□□ -0.05
COL21A1Q96P44 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL21A1Q96P44 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
COL21A1Q96P44 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 RPL37AP1-201ENST00000412502 279 ntBASIC14.74□□□□□ -0.05
COL21A1Q96P44 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 PHKG1P2-201ENST00000457537 863 ntBASIC14.74□□□□□ -0.05
COL21A1Q96P44 SERBP1P3-201ENST00000459980 809 ntBASIC14.74□□□□□ -0.05
COL21A1Q96P44 CYMP-203ENST00000474680 1263 ntBASIC14.74□□□□□ -0.05
COL21A1Q96P44 AC097493.3-201ENST00000509725 367 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms