Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.7■□□□□ 0.9
CFAP53Q96M91 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CFAP53Q96M91 TDH-203ENST00000531764 1110 ntBASIC20.7■□□□□ 0.9
CFAP53Q96M91 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.7■□□□□ 0.9
CFAP53Q96M91 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.7■□□□□ 0.9
CFAP53Q96M91 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.7■□□□□ 0.9
CFAP53Q96M91 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.7■□□□□ 0.9
CFAP53Q96M91 BX539320.1-201ENST00000623759 877 ntBASIC20.7■□□□□ 0.9
CFAP53Q96M91 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.7■□□□□ 0.9
CFAP53Q96M91 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 SSR4P1-203ENST00000599569 2260 ntBASIC20.7■□□□□ 0.9
CFAP53Q96M91 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CFAP53Q96M91 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP53Q96M91 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 AC136621.1-201ENST00000624017 2304 ntBASIC20.69■□□□□ 0.9
CFAP53Q96M91 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 PTP4A1P2-201ENST00000546033 454 ntBASIC20.69■□□□□ 0.9
CFAP53Q96M91 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP53Q96M91 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC20.69■□□□□ 0.9
CFAP53Q96M91 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 AC105917.1-201ENST00000506637 2539 ntBASIC20.68■□□□□ 0.9
CFAP53Q96M91 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 ACKR1-201ENST00000368121 1240 ntBASIC20.68■□□□□ 0.9
CFAP53Q96M91 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 SAMD11P1-201ENST00000571429 661 ntBASIC20.68■□□□□ 0.9
CFAP53Q96M91 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 AC008735.3-201ENST00000596646 500 ntBASIC20.68■□□□□ 0.9
CFAP53Q96M91 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms