Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 AC008738.7-201ENST00000609744 511 ntBASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 AL390754.1-201ENST00000619088 582 ntBASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 AC004840.1-201ENST00000636359 365 ntBASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 ACE3P-201ENST00000423435 1973 ntBASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 AC135586.1-201ENST00000539323 574 ntBASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 RARRES2P5-201ENST00000564013 466 ntBASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 AL390955.2-201ENST00000603032 514 ntBASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 AC093512.1-201ENST00000617969 520 ntBASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 REXO1L4P-201ENST00000605109 1937 ntBASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM5Q96HC4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms