Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HPS1Q92902 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HPS1Q92902 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HPS1Q92902 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.38□□□□□ -0.11
HPS1Q92902 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.38□□□□□ -0.11
HPS1Q92902 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.38□□□□□ -0.11
HPS1Q92902 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.38□□□□□ -0.11
HPS1Q92902 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 HLA-J-202ENST00000469281 1241 ntBASIC14.38□□□□□ -0.11
HPS1Q92902 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC14.38□□□□□ -0.11
HPS1Q92902 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.38□□□□□ -0.11
HPS1Q92902 PDPK2P-202ENST00000562415 1191 ntBASIC14.38□□□□□ -0.11
HPS1Q92902 MIR4469-201ENST00000583919 79 ntBASIC14.38□□□□□ -0.11
HPS1Q92902 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HPS1Q92902 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HPS1Q92902 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HPS1Q92902 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 REXO1L1P-202ENST00000608646 1974 ntBASIC14.38□□□□□ -0.11
HPS1Q92902 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 AC129492.6-201ENST00000611383 1305 ntBASIC14.38□□□□□ -0.11
HPS1Q92902 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.38□□□□□ -0.11
HPS1Q92902 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.37□□□□□ -0.11
HPS1Q92902 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.37□□□□□ -0.11
HPS1Q92902 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.37□□□□□ -0.11
HPS1Q92902 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.37□□□□□ -0.11
HPS1Q92902 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.37□□□□□ -0.11
HPS1Q92902 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HPS1Q92902 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.37□□□□□ -0.11
HPS1Q92902 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 HCG24-202ENST00000414398 717 ntTSL 3 BASIC14.37□□□□□ -0.11
HPS1Q92902 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.37□□□□□ -0.11
HPS1Q92902 RHOQP3-201ENST00000437982 621 ntBASIC14.37□□□□□ -0.11
HPS1Q92902 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.37□□□□□ -0.11
HPS1Q92902 AC087163.2-201ENST00000457299 853 ntBASIC14.37□□□□□ -0.11
HPS1Q92902 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC14.37□□□□□ -0.11
HPS1Q92902 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HPS1Q92902 AC018845.2-201ENST00000568326 409 ntBASIC14.37□□□□□ -0.11
HPS1Q92902 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.37□□□□□ -0.11
HPS1Q92902 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HPS1Q92902 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HPS1Q92902 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.37□□□□□ -0.11
HPS1Q92902 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 KRT18P28-201ENST00000453838 1332 ntBASIC14.37□□□□□ -0.11
HPS1Q92902 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HPS1Q92902 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HPS1Q92902 AC138969.2-201ENST00000532739 9932 ntBASIC14.36□□□□□ -0.11
HPS1Q92902 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.36□□□□□ -0.11
HPS1Q92902 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms