Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.48■□□□□ 0.39
USP6NLQ92738 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.48■□□□□ 0.39
USP6NLQ92738 AC091812.3-201ENST00000621362 345 ntBASIC17.48■□□□□ 0.39
USP6NLQ92738 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP6NLQ92738 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP6NLQ92738 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP6NLQ92738 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.48■□□□□ 0.39
USP6NLQ92738 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
USP6NLQ92738 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
USP6NLQ92738 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.47■□□□□ 0.39
USP6NLQ92738 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.47■□□□□ 0.39
USP6NLQ92738 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP6NLQ92738 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
USP6NLQ92738 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.47■□□□□ 0.39
USP6NLQ92738 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
USP6NLQ92738 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP6NLQ92738 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.47■□□□□ 0.39
USP6NLQ92738 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 AL645937.2-201ENST00000396808 931 ntBASIC17.47■□□□□ 0.39
USP6NLQ92738 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
USP6NLQ92738 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.47■□□□□ 0.39
USP6NLQ92738 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.47■□□□□ 0.39
USP6NLQ92738 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.47■□□□□ 0.39
USP6NLQ92738 COX5BP1-201ENST00000507622 393 ntBASIC17.47■□□□□ 0.39
USP6NLQ92738 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.47■□□□□ 0.39
USP6NLQ92738 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.47■□□□□ 0.39
USP6NLQ92738 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.47■□□□□ 0.39
USP6NLQ92738 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.47■□□□□ 0.39
USP6NLQ92738 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.47■□□□□ 0.39
USP6NLQ92738 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.47■□□□□ 0.39
USP6NLQ92738 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 AC079328.2-201ENST00000561241 3354 ntBASIC17.47■□□□□ 0.39
USP6NLQ92738 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP6NLQ92738 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
USP6NLQ92738 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP6NLQ92738 TUBBP5-203ENST00000508529 1334 ntBASIC17.47■□□□□ 0.39
USP6NLQ92738 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
USP6NLQ92738 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.46■□□□□ 0.39
USP6NLQ92738 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
USP6NLQ92738 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.46■□□□□ 0.39
USP6NLQ92738 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 POM121L8P-201ENST00000417732 1281 ntBASIC17.46■□□□□ 0.39
USP6NLQ92738 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.46■□□□□ 0.39
USP6NLQ92738 POM121L9P-203ENST00000441984 1285 ntBASIC17.46■□□□□ 0.39
USP6NLQ92738 SPTLC1P5-201ENST00000450718 252 ntBASIC17.46■□□□□ 0.39
USP6NLQ92738 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.46■□□□□ 0.39
USP6NLQ92738 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.46■□□□□ 0.39
USP6NLQ92738 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.46■□□□□ 0.39
USP6NLQ92738 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.46■□□□□ 0.39
USP6NLQ92738 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.46■□□□□ 0.39
USP6NLQ92738 RN7SL713P-201ENST00000582127 302 ntBASIC17.46■□□□□ 0.39
USP6NLQ92738 PPY2P-201ENST00000582808 702 ntBASIC17.46■□□□□ 0.39
USP6NLQ92738 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 AC073413.1-201ENST00000603927 732 ntBASIC17.46■□□□□ 0.39
USP6NLQ92738 AC138649.2-201ENST00000615886 705 ntBASIC17.46■□□□□ 0.39
USP6NLQ92738 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.46■□□□□ 0.39
USP6NLQ92738 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
USP6NLQ92738 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP6NLQ92738 KRT8P14-201ENST00000414254 1442 ntBASIC17.46■□□□□ 0.39
USP6NLQ92738 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.38
USP6NLQ92738 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
USP6NLQ92738 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP6NLQ92738 AC007787.1-201ENST00000588095 1583 ntBASIC17.45■□□□□ 0.38
USP6NLQ92738 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms