Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
AP3S1Q92572 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
AP3S1Q92572 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
AP3S1Q92572 MTHFR-210ENST00000641407 2387 ntBASIC13.76□□□□□ -0.21
AP3S1Q92572 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
AP3S1Q92572 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.75□□□□□ -0.21
AP3S1Q92572 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
AP3S1Q92572 AC006504.4-201ENST00000592118 1568 ntBASIC13.75□□□□□ -0.21
AP3S1Q92572 AC107918.4-201ENST00000641966 3141 ntBASIC13.75□□□□□ -0.21
AP3S1Q92572 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S1Q92572 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.75□□□□□ -0.21
AP3S1Q92572 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.75□□□□□ -0.21
AP3S1Q92572 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.75□□□□□ -0.21
AP3S1Q92572 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
AP3S1Q92572 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
AP3S1Q92572 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
AP3S1Q92572 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
AP3S1Q92572 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.75□□□□□ -0.21
AP3S1Q92572 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S1Q92572 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
AP3S1Q92572 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
AP3S1Q92572 AC005521.1-201ENST00000393351 872 ntBASIC13.75□□□□□ -0.21
AP3S1Q92572 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.75□□□□□ -0.21
AP3S1Q92572 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
AP3S1Q92572 AC022616.7-201ENST00000525383 220 ntBASIC13.75□□□□□ -0.21
AP3S1Q92572 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.75□□□□□ -0.21
AP3S1Q92572 AC002347.1-201ENST00000569543 541 ntBASIC13.75□□□□□ -0.21
AP3S1Q92572 AC006557.2-201ENST00000592985 1240 ntBASIC13.75□□□□□ -0.21
AP3S1Q92572 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.75□□□□□ -0.21
AP3S1Q92572 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
AP3S1Q92572 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S1Q92572 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
AP3S1Q92572 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S1Q92572 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
AP3S1Q92572 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S1Q92572 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.75□□□□□ -0.21
AP3S1Q92572 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S1Q92572 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
AP3S1Q92572 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.74□□□□□ -0.21
AP3S1Q92572 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.74□□□□□ -0.21
AP3S1Q92572 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
AP3S1Q92572 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
AP3S1Q92572 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.74□□□□□ -0.21
AP3S1Q92572 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.74□□□□□ -0.21
AP3S1Q92572 PMS2P7-201ENST00000506558 1336 ntBASIC13.74□□□□□ -0.21
AP3S1Q92572 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.74□□□□□ -0.21
AP3S1Q92572 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
AP3S1Q92572 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S1Q92572 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.74□□□□□ -0.21
AP3S1Q92572 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms