Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MIR346-201ENST00000362234 95 ntBASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 RPSAP43-201ENST00000402237 625 ntBASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 AC112482.1-201ENST00000492080 688 ntBASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 AC092865.5-201ENST00000545435 363 ntBASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 LINC01225-203ENST00000563550 1244 ntBASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 AC022145.2-201ENST00000598203 171 ntBASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 AC105339.1-204ENST00000636249 355 ntBASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 UXT-AS1-201ENST00000590504 1525 ntBASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 AC243562.2-201ENST00000561247 970 ntBASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 AC023024.2-201ENST00000623561 1993 ntBASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 GRK6P1-201ENST00000400595 1711 ntBASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RTN4IP1Q8WWV3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms