Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 AC148477.4-201ENST00000613430 1793 ntBASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 AL033527.5-202ENST00000641632 1098 ntBASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 FO538757.1-201ENST00000623083 1397 ntBASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 AC126365.1-201ENST00000578585 1514 ntBASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 TUBB3P1-201ENST00000405796 1332 ntBASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 HLA-V-204ENST00000476601 1289 ntBASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 KRT8P44-201ENST00000441609 1350 ntBASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRAF3IP1Q8TDR0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms