Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 AC099568.2-201ENST00000609194 695 ntBASIC16.45■□□□□ 0.22
UBA3Q8TBC4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 AC007431.3-201ENST00000623221 587 ntBASIC16.45■□□□□ 0.22
UBA3Q8TBC4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 MST1L-201ENST00000442552 2185 ntBASIC16.44■□□□□ 0.22
UBA3Q8TBC4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 DBET-201ENST00000630918 3363 ntBASIC16.44■□□□□ 0.22
UBA3Q8TBC4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 AL391825.1-201ENST00000457671 1364 ntBASIC16.44■□□□□ 0.22
UBA3Q8TBC4 AC126177.1-201ENST00000547829 2218 ntBASIC16.44■□□□□ 0.22
UBA3Q8TBC4 AC087499.6-201ENST00000411576 835 ntBASIC16.44■□□□□ 0.22
UBA3Q8TBC4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 RRP7BP-205ENST00000566851 833 ntBASIC16.44■□□□□ 0.22
UBA3Q8TBC4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 AC093726.1-201ENST00000608064 963 ntBASIC16.44■□□□□ 0.22
UBA3Q8TBC4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.44■□□□□ 0.22
UBA3Q8TBC4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 CRB3P1-201ENST00000449338 276 ntBASIC16.43■□□□□ 0.22
UBA3Q8TBC4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 VDAC1P7-201ENST00000462417 847 ntBASIC16.43■□□□□ 0.22
UBA3Q8TBC4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 AC104596.2-201ENST00000512793 793 ntBASIC16.43■□□□□ 0.22
UBA3Q8TBC4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 WASH4P-201ENST00000564273 1246 ntBASIC16.43■□□□□ 0.22
UBA3Q8TBC4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 AL049840.4-201ENST00000602422 811 ntBASIC16.43■□□□□ 0.22
UBA3Q8TBC4 AL662799.1-202ENST00000614205 422 ntBASIC16.43■□□□□ 0.22
UBA3Q8TBC4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms