Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMG8Q8ND04 MIR6869-201ENST00000619434 62 ntBASIC16.62■□□□□ 0.25
SMG8Q8ND04 AC006453.4-201ENST00000636949 1252 ntBASIC16.62■□□□□ 0.25
SMG8Q8ND04 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.62■□□□□ 0.25
SMG8Q8ND04 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMG8Q8ND04 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMG8Q8ND04 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.62■□□□□ 0.25
SMG8Q8ND04 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMG8Q8ND04 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMG8Q8ND04 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMG8Q8ND04 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.62■□□□□ 0.25
SMG8Q8ND04 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMG8Q8ND04 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMG8Q8ND04 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
SMG8Q8ND04 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMG8Q8ND04 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMG8Q8ND04 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 MIR1202-201ENST00000408529 83 ntBASIC16.61■□□□□ 0.25
SMG8Q8ND04 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 EIF3FP3-201ENST00000434851 1086 ntBASIC16.61■□□□□ 0.25
SMG8Q8ND04 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 RN7SL48P-201ENST00000579283 293 ntBASIC16.61■□□□□ 0.25
SMG8Q8ND04 MIR4525-201ENST00000580000 75 ntBASIC16.61■□□□□ 0.25
SMG8Q8ND04 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 RN7SL219P-201ENST00000582872 296 ntBASIC16.61■□□□□ 0.25
SMG8Q8ND04 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 AHCYP2-201ENST00000430630 1300 ntBASIC16.61■□□□□ 0.25
SMG8Q8ND04 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.61■□□□□ 0.25
SMG8Q8ND04 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMG8Q8ND04 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 LRRC59-203ENST00000576448 1531 ntBASIC16.6■□□□□ 0.25
SMG8Q8ND04 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 BRWD1P1-201ENST00000401091 371 ntBASIC16.6■□□□□ 0.25
SMG8Q8ND04 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 CD8B2-202ENST00000417670 633 ntBASIC16.6■□□□□ 0.25
SMG8Q8ND04 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 AC108725.1-201ENST00000495472 409 ntBASIC16.6■□□□□ 0.25
SMG8Q8ND04 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.6■□□□□ 0.25
SMG8Q8ND04 RN7SL560P-201ENST00000577943 264 ntBASIC16.6■□□□□ 0.25
SMG8Q8ND04 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMG8Q8ND04 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SMG8Q8ND04 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms