Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 AC098850.1-201ENST00000419919 790 ntBASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 MEP1AP4-201ENST00000423244 1087 ntBASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 ACA64.2-201ENST00000459014 129 ntBASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 ELK1P1-201ENST00000485699 580 ntBASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 KRT17P8-201ENST00000540749 863 ntBASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 AL450472.2-201ENST00000603663 1156 ntBASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 AL162274.1-201ENST00000617191 1098 ntBASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CCDC33Q8N5R6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 AC079776.1-201ENST00000401540 1152 ntBASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 TTTY23B-201ENST00000442790 549 ntBASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 PHKG1P2-201ENST00000457537 863 ntBASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 RAB43P1-201ENST00000561790 589 ntBASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC33Q8N5R6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 MIR1909-201ENST00000411312 80 ntBASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 HIST3H2BA-201ENST00000436555 524 ntBASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms